DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alk and Mst1r

DIOPT Version :9

Sequence 1:NP_001261027.1 Gene:Alk / 53425 FlyBaseID:FBgn0040505 Length:1701 Species:Drosophila melanogaster
Sequence 2:XP_006511717.1 Gene:Mst1r / 19882 MGIID:99614 Length:1406 Species:Mus musculus


Alignment Length:861 Identity:217/861 - (25%)
Similarity:320/861 - (37%) Gaps:263/861 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   858 KQDMVKNIYIENG--------------AGGGGGGSYVFLLNQAKNEAVPLLVAGGGGGLGIGQYI 908
            |...|:.|.::.|              .|...||:|:.|..|:.:......|...|....:.|..
Mouse   668 KHFRVEGISVQEGFSFVEPVLTSIKPDFGPRAGGTYLTLEGQSLSVGTSRAVLVNGTQCRLEQVN 732

  Fly   909 DEDF------QHGQKAKPLQAPESGQINGEPLNKKTAGPGGGW--RAKEDQA---LSPTYGAALL 962
            :|..      ..|....||..    ||.|       |...|.|  ..|||..   :||..|.   
Mouse   733 EEQILCVTPPGAGTARVPLHL----QIGG-------AEVPGSWTFHYKEDPIVLDISPKCGY--- 783

  Fly   963 QGGRGGHSCYVELADNGTSVHRHGQG---------GFGGGGGGCNTGGGGG-------------- 1004
                           :|:.:..|||.         .|..|.....:....|              
Mouse   784 ---------------SGSHIMIHGQHLTSAWHFTLSFHDGQSTVESRQCAGQFVEQQQRRCRLPE 833

  Fly  1005 -------GYAGGDVYLTESNGEGGSSYISPS-RSLREISEIHAG-ASSGPGAIIIIPAIEGCGCD 1060
                   |:|.|::.:.   |:|.:.:..|. |.|...|.:.|| ....|....:.....|.|..
Mouse   834 YVVRNPQGWATGNLSVW---GDGAAGFTLPGFRFLPPPSPLRAGLVELKPEEHSVKVEYVGLGAV 895

  Fly  1061 YRCVALD----------EFRSKVRCICP---------DGWSLKRDNHTACEI-----REEAGKSS 1101
            ..||.::          |.|..| .|||         ||..|:......|.|     |...|::|
Mouse   896 ADCVTVNMTVGGEVCQHELRGDV-VICPLPPSLQLGKDGVPLQVCVDGGCHILSQVVRSSPGRAS 959

  Fly  1102 FQYLVSILMISLAVLFICIAAL-IFMLYNRYQRKKQSKKRHKMLVEQDLQLTRLRNNIDDSNL-- 1163
            .:    ||:|:|.||.:.:|.| :.:::|..:||||       |....|..|.| ::|:|:..  
Mouse   960 QR----ILLIALLVLILLVAVLAVALIFNSRRRKKQ-------LGAHSLSPTTL-SDINDTASGA 1012

  Fly  1164 -NNFNPNYGCDGILNGHIDVNSLPQVARDSLQLVN-------------------------ALGKG 1202
             |:...:...||        .|:|.:..:|::|.:                         .:|||
Mouse  1013 PNHEESSESRDG--------TSVPLLRTESIRLQDLDRMLLAEVKDVLIPHEQVVIHTDQVIGKG 1069

  Fly  1203 AFGEVYMALYRHRDGDAVEMGVAVKTLREDPKREKEEDFLKEAAIMAKFNHPNMVHLIGVCFDRQ 1267
            .||.||...|  .||...:...|:|:|....:.::.|.||:|..:|...:|||::.|||:....:
Mouse  1070 HFGVVYHGEY--TDGAQNQTHCAIKSLSRITEVQEVEAFLREGLLMRGLHHPNILALIGIMLPPE 1132

  Fly  1268 PY-YIVLELLAGGDLQKFLRENRNTPER-------------------------PSLLTMKDLLFC 1306
            .. .::|..:..|||..|:|    :|:|                         |...|:|||:..
Mouse  1133 GLPRVLLPYMRHGDLLHFIR----SPQRVSDHCPGWEVSASTHPCLRSPVTLCPQNPTVKDLVSF 1193

  Fly  1307 ALDVAKGCRYMESKRFIHRDIAARNCLLSSKGPGRVVKIADFGMSRDIYRSDYY--RKGGKAMLP 1369
            .|.||.|..|:..::|:|||:|||||:|..   ...||:||||::|.:...:||  |:...|.||
Mouse  1194 GLQVACGMEYLAEQKFVHRDLAARNCMLDE---SFTVKVADFGLARGVLDKEYYSVRQHRHARLP 1255

  Fly  1370 IKWMPPEAFLDGIFTSKTDVWSFGILLWEVFSLGRSPYPGQHNTQVMELVVRGGRLGSPTECPVS 1434
            :|||..|:.....||:|:||||||:||||:.:.|..|||......:...:.:|.||..|..||.|
Mouse  1256 VKWMALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYPHIDPFDLSHFLAQGRRLPQPEYCPDS 1320

  Fly  1435 IYKVMADCWNPTPEDRPTFITL-LEHLTACTQDASIMNAPLPNILGPTASERDDTVIRPPNGEEF 1498
            :|.||..||...|..||||..| ||           :...:.::||                   
Mouse  1321 LYHVMLRCWEADPAARPTFRALVLE-----------VKQVVASLLG------------------- 1355

  Fly  1499 CLAVPDYLVPLPPGGSNNPSMASGSGYVPELQRQQMSSCTPPAVTSPAAPHPRPVENIAPTSGDC 1563
                 |:.|.|.....|....|...|.||.                         |.:.|:...|
Mouse  1356 -----DHYVQLTAAYVNVGPRAVDDGSVPP-------------------------EQVQPSPQHC 1390

  Fly  1564 WETSFILPNSKVEPPV 1579
            ..||  .|....|||:
Mouse  1391 RSTS--KPRPLSEPPL 1404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlkNP_001261027.1 MAM 288..450 CDD:279023
MAM 288..447 CDD:99706
MAM 505..691 CDD:279023
MAM 505..689 CDD:99706
PTKc_ALK_LTK 1186..1462 CDD:270632 109/329 (33%)
TyrKc 1193..1460 CDD:197581 107/320 (33%)
Mst1rXP_006511717.1 Sema_RON 29..525 CDD:200540
PSI 528..570 CDD:214655
IPT 571..685 CDD:387656 4/16 (25%)
IPT_plexin_repeat2 686..770 CDD:238584 19/94 (20%)
IPT 771..864 CDD:214657 17/113 (15%)
PKc_like 1064..1352 CDD:389743 106/307 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1095
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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