DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alk and LOC100496572

DIOPT Version :9

Sequence 1:NP_001261027.1 Gene:Alk / 53425 FlyBaseID:FBgn0040505 Length:1701 Species:Drosophila melanogaster
Sequence 2:XP_002935671.2 Gene:LOC100496572 / 100496572 -ID:- Length:1368 Species:Xenopus tropicalis


Alignment Length:487 Identity:151/487 - (31%)
Similarity:236/487 - (48%) Gaps:85/487 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly  1070 RSKVRCICPDGWSLKRDNH--TACEIREEAGKSSFQYLVSILMISLAVLF------ICIAALIFM 1126
            ::::.|..|.|..:..:..  ..| :.::........:|::|...|.::.      :.:|.|||:
 Frog   892 KNEITCRIPKGMVIPSEGSIVQVC-VDDDCTTVGLVMIVNMLDPVLGIVLGSVASVLVVAVLIFL 955

  Fly  1127 LYNRYQRKKQSKKRHKMLVEQDLQLTRLRNNIDDSNLN-----------NFNPNYGCDGILN--- 1177
            |.     |.|.||:.|..||   .|..|.||..:..|:           ::.|:....|:|:   
 Frog   956 LL-----KHQRKKKKKPAVE---ALELLSNNNREPVLSPISLLHVDYRTSYIPSSNSGGMLSHGA 1012

  Fly  1178 ----GHIDVNSLPQVAR---DSLQ----------LV----------NALGKGAFGEVYMALYRHR 1215
                |.:...|:|.:..   |||:          |:          ..:|||.||.||...|  .
 Frog  1013 GYSGGSLGGGSMPILLTSLLDSLRPELLEEVKDVLIPERCLTTHRDRIIGKGHFGSVYHGTY--V 1075

  Fly  1216 DGDAVEMGVAVKTLREDPKREKEEDFLKEAAIMAKFNHPNMVHLIGVCFDRQPY-YIVLELLAGG 1279
            |.|..|:..|||:|......|:.|:||:|..:|..|:|||::.|||:...::.. .:||..:..|
 Frog  1076 DEDQQEVHCAVKSLNRITDLEEVEEFLREGILMKSFHHPNVLSLIGIFLPQEGLPLVVLPFMKHG 1140

  Fly  1280 DLQKFLRENRNTPERPSLLTMKDLLFCALDVAKGCRYMESKRFIHRDIAARNCLLSSKGPGRVVK 1344
            ||:.|:|.....|      |:|||:...|.|::|..|:.:::|:|||:|||||:|.....   ||
 Frog  1141 DLRHFIRCQERNP------TVKDLVGFGLQVSRGMEYLANRKFVHRDLAARNCMLDETFH---VK 1196

  Fly  1345 IADFGMSRDIYRSDYY--RKGGKAMLPIKWMPPEAFLDGIFTSKTDVWSFGILLWEVFSLGRSPY 1407
            :||||::||::..:||  |:...|.||:|||..|:.....||:|:||||||:||||:.:.|..||
 Frog  1197 VADFGLARDVFDKEYYSVRRHKNARLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 1261

  Fly  1408 PGQHNTQVMELVVRGGRLGSPTECPVSIYKVMADCWNPTPEDRPTFITLLEHL-----TACTQDA 1467
            |......:...:.||.||..|..||..:|.:|..||||.||:||||..|:..:     :.|....
 Frog  1262 PDVDPYDITRYLFRGRRLAQPEYCPDPLYSLMLSCWNPQPEERPTFTQLVGDMEVISNSLCGDHY 1326

  Fly  1468 SIMNAPLPNILGPTASERDDTV--IRPPNGEE 1497
            ..:|....|:      :||...  ..||:.:|
 Frog  1327 INLNVTYVNL------DRDQPFPPTHPPSEDE 1352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlkNP_001261027.1 MAM 288..450 CDD:279023
MAM 288..447 CDD:99706
MAM 505..691 CDD:279023
MAM 505..689 CDD:99706
PTKc_ALK_LTK 1186..1462 CDD:270632 114/306 (37%)
TyrKc 1193..1460 CDD:197581 111/289 (38%)
LOC100496572XP_002935671.2 Sema 21..501 CDD:417757
PSI 504..>544 CDD:396154
IPT 547..658 CDD:417750
IPT_plexin_repeat2 659..745 CDD:238584
IPT 747..835 CDD:238050
PTKc_Met_Ron 1059..1320 CDD:270649 109/271 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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