DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alk and met

DIOPT Version :10

Sequence 1:NP_652600.1 Gene:Alk / 53425 FlyBaseID:FBgn0040505 Length:1701 Species:Drosophila melanogaster
Sequence 2:NP_001007125.1 Gene:met / 100150664 ZFINID:ZDB-GENE-041014-1 Length:1382 Species:Danio rerio


Alignment Length:464 Identity:146/464 - (31%)
Similarity:220/464 - (47%) Gaps:107/464 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  1106 VSILMISLAVLFICIAALIFMLYNRYQRKKQSKKRHKMLVEQD-----LQLTRLRNN-------- 1157
            ||||::.|..:|:.|           :|||......|.:|..|     ..|..|.|.        
Zfish   940 VSILLLLLIAVFVWI-----------KRKKHIDDLAKTMVWYDGRAHIPHLDMLANARSVSPTDE 993

  Fly  1158 -------------IDDSNLNNFNPNYGCDGILNGH--------------------------IDVN 1183
                         ::|.|| ..:....|...|..|                          ||:.
Zfish   994 MVSHESVDYRTTLLEDQNL-PLSQTESCRPHLYAHSHVDLSPMLGPMEGDLASPLLPSTAPIDLG 1057

  Fly  1184 SL-PQ---------VARDSLQL-VN-ALGKGAFGEVYMALYRHRDGDAVEMGVAVKTLREDPKRE 1236
            || |:         :||:.|.| || .:|:|.||.|:.......||.  :...|:|:|......|
Zfish  1058 SLHPELLKXVQHVVIAREDLLLHVNEIIGRGHFGCVFHGTLLEPDGQ--KQHCAIKSLNRITDIE 1120

  Fly  1237 KEEDFLKEAAIMAKFNHPNMVHLIGVCF--DRQPYYIVLELLAGGDLQKFLRENRNTPERPSLLT 1299
            :...||||..|:..|:|||::.|:|:|.  :..| .:||..:..|||:.|:|:..:.|      |
Zfish  1121 EVSQFLKEGIIVKDFSHPNVLSLLGICLPSEGSP-LVVLPYMKHGDLRNFIRDESHNP------T 1178

  Fly  1300 MKDLLFCALDVAKGCRYMESKRFIHRDIAARNCLLSSKGPGRVVKIADFGMSRDIYRSDYYRKGG 1364
            :|||:...|.||||..|:.||:|:|||:|||||:|..   ...||:||.|::||:|..:||....
Zfish  1179 VKDLMGFGLQVAKGMEYLASKKFVHRDLAARNCMLDE---SYTVKVADVGLARDVYDKEYYSVHN 1240

  Fly  1365 K--AMLPIKWMPPEAFLDGIFTSKTDVWSFGILLWEVFSLGRSPYPGQHNTQVMELVVRGGRLGS 1427
            |  ..||:|||..|:.....||:|:||||||:||||:.:.|..||...::..:...:::|.||..
Zfish  1241 KHGVKLPVKWMALESLQTHKFTTKSDVWSFGVLLWELMTRGAPPYSDVNSFDITVFLLQGRRLLQ 1305

  Fly  1428 PTECPVSIYKVMADCWNPTPEDRPTFITLLEHLTACTQDAS-----IMN---------APLPNIL 1478
            |..||.::|.||.:||:|.||.||||:.|:..::|.....|     ::|         .|.|:::
Zfish  1306 PEFCPDALYNVMIECWHPKPERRPTFLELVSRISAIFSSFSGEHYILLNTTYVNIDKMTPYPSLI 1370

  Fly  1479 GPTAS-ERD 1486
            ...:: :||
Zfish  1371 SSQSNLDRD 1379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlkNP_652600.1 MAM 288..447 CDD:99706
MAM 505..689 CDD:99706
PTKc_ALK_LTK 1186..1462 CDD:270632 113/290 (39%)
metNP_001007125.1 Sema_MET_like 43..511 CDD:200509
PSI 514..559 CDD:214655
IPT 562..653 CDD:472823
IPT_plexin_repeat2 654..736 CDD:238584
IPT 740..823 CDD:472823
PTKc_Met_Ron 1083..1344 CDD:270649 107/272 (39%)
Blue background indicates that the domain is not in the aligned region.

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