DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PLD1 and Pld

DIOPT Version :9

Sequence 1:NP_002653.1 Gene:PLD1 / 5337 HGNCID:9067 Length:1074 Species:Homo sapiens
Sequence 2:NP_001137610.1 Gene:Pld / 35554 FlyBaseID:FBgn0286511 Length:1364 Species:Drosophila melanogaster


Alignment Length:1247 Identity:452/1247 - (36%)
Similarity:645/1247 - (51%) Gaps:240/1247 - (19%)


- Green bases have known domain annotations that are detailed below.


Human    20 DMSNIIENLDTRELHFEGEEVD-----YDVSPSDPKIQEVYIPFSAIYN-TQGFKEPNIQTYLSG 78
            |...|:.|:..:.:..|.:|.|     :|...::..:....|||::||. :..|.....:.::.|
  Fly   166 DSVTILSNVGDKPVLVERKETDDDEEEFDDEENNSVVLRHEIPFTSIYGPSVKFNSFQRKVFIPG 230

Human    79 CPIKAQVLEVERFTSTTRVPSINLYTIELTHGEFKWQVKRKFKHFQEFHRELLKYKAFIRIPIPT 143
            ..|..::::.|| :.||.:.:.||||||||||.|||.:||::|||...|::|..::..:.||.|:
  Fly   231 REIHVRIVDTER-SVTTHLLNPNLYTIELTHGPFKWTIKRRYKHFNSLHQQLSFFRTSLNIPFPS 294

Human   144 RRHTFRRQNVREEPREM------------------------------------------------ 160
            |.|..:|..::...|||                                                
  Fly   295 RSHKEKRTTLKATAREMADESTLKDLPSHTKVKQTSTPLRAEGRSSKIAGSNANNAMAMISPNHS 359

Human   161 -----------------------PSLPRSSENMIREEQFLGRRKQLEDYLTKILKMPMYRNYHAT 202
                                   |..|...|:::..|....|.|||||||..:|.:.:||::|.|
  Fly   360 SILAGLTPRRIQKKRKKKKKRKLPRFPNRPESLVTVENLSVRIKQLEDYLYNLLNISLYRSHHET 424

Human   203 TEFLDISQLSFIHDLGPKGIEGMIMKRSGGHRIPG-----------LNCCGQGR------ACYRW 250
            ..|:::|.:||:..:|.||.||:|:||:|..| ||           .|||.:..      .|..|
  Fly   425 LNFVEVSNVSFVPGMGIKGKEGVILKRTGSTR-PGQAGCNFFGCFQKNCCVRCNYFCSDVVCGTW 488

Human   251 SKRWLIVKDSFLLYMKPDSGAIAFVLLVDKEFKIKVGKKETETKYGIRIDNLSRTLILKCNSYRH 315
            ..||..||::...|::|..|:|..|:|.|:.|.:..|..:|..:.|:::...:|.::|||.:.|.
  Fly   489 RNRWFFVKETCFGYIRPTDGSIRAVILFDQGFDVSTGIYQTGMRKGLQVLTNNRHIVLKCWTRRK 553

Human   316 ARWWGGAIEEFIQKHGTNFLKDHRFGSYAAIQENALAKWYVNAKGYFEDVANAMEEANEEIFITD 380
            .:.|...::.....:..:|...:...|:|.::.|..|.|||:...|...||:.:|.|.|||:|.|
  Fly   554 CKEWMQYLKNTANSYARDFTLPNPHMSFAPMRANTHATWYVDGAQYMSAVADGLEAALEEIYIAD 618

Human   381 WWLSPEIFLKRPVVEGNRWRLDCILKRKAQQGVRIFIMLYKEVELALGINSEYTKRTLMRLHPNI 445
            |||||||::|||.::|:.||||.||.|||:||||:|::||||||:||||||.|:|.||.: |.||
  Fly   619 WWLSPEIYMKRPALDGDYWRLDKILLRKAEQGVRVFVLLYKEVEMALGINSYYSKSTLAK-HENI 682

Human   446 KVMRHPDHVSSTVYLWAHHEKLVIIDQSVAFVGGIDLAYGRWDDNEHRLTDVGSVKRVT-SG--- 506
            ||||||||....:.|||||||:|:|||:.||:|||||.||||||:.|||||:||:...: ||   
  Fly   683 KVMRHPDHARGGILLWAHHEKIVVIDQTYAFMGGIDLCYGRWDDHHHRLTDLGSISTSSFSGSTR 747

Human   507 --PSL------------------------------------------------------------ 509
              |||                                                            
  Fly   748 RTPSLYFTKDDTDSAFGSRKSSRNAHYDTSAKERPPSPPPDEPNTSIELKTLKPGDRLLIPSTLV 812

Human   510 ---GSLPPAAMESMESLRLKDKNEPVQNLPIQKSIDD--VDSKLKGIGKPRKFSKFSLYKQLHRH 569
               |..|..:..::|.::|   |.|...   :|::.|  .::.:||....:.|        :||.
  Fly   813 SSPGETPAESGIALEGMKL---NTPEME---RKNVLDRLKNNAMKGARMGKDF--------MHRL 863

Human   570 HLHDAD-------SISSIDSTSSYFNHYRSHHNLIHGLKPHFKLFHPSSESEQGLTRPHADTGSI 627
            ...:.:       :|.|.::|....|                 |...|...|..:|     |.|.
  Fly   864 TATETEEKSAEVYTIESEEATDHEVN-----------------LNMASGGQEVAIT-----TSST 906

Human   628 RSLQTGVGELHGETRFWHGKDYCNFVFKDWVQLDKPFADFIDRYSTPRMPWHDIASAVHGKAARD 692
            :.|    .|..|:.::|.||||.||:.|||:.|:.||.|.|||.:||||||||:...|.|.:|||
  Fly   907 QIL----SEFCGQAKYWFGKDYSNFILKDWMNLNSPFVDIIDRTTTPRMPWHDVGLCVVGTSARD 967

Human   693 VARHFIQRWNFTKIMKSKYRSLSYPFLLPKSQTTAHELR----YQVPGSVHANVQLLRSAADWSA 753
            ||||||||||..|:.|.: .:..:|:|:|||.   |::|    .|.........|||||.:.||.
  Fly   968 VARHFIQRWNAMKLEKLR-DNTRFPYLMPKSY---HQVRLNPNIQQNRQQRVTCQLLRSVSAWSC 1028

Human   754 GI---KYHEESIHAAYVHVIENSRHYIYIENQFFISC-------ADDKVVFNKIGDAIAQRILKA 808
            |.   ...|:|||.||:..|..::||:||||||||:.       .....|.|:||:.:.:||::|
  Fly  1029 GFIEADLVEQSIHDAYIQTITKAQHYVYIENQFFITMQLGMGVPGAYNNVRNQIGETLFKRIVRA 1093

Human   809 HRENQKYRVYVVIPLLPGFEGDISTGGGNALQAIMHFNYRTMCRGENSILGQL-KAELGNQWINY 872
            |:|.:.:||||::|||||||||:....|.|::||.|:||.::.||..|||.:| :|.:.|. .||
  Fly  1094 HKERKPFRVYVIMPLLPGFEGDVGGSTGIAVRAITHWNYASISRGRTSILTRLQEAGIANP-ENY 1157

Human   873 ISFCGLRTHAELEGNLVTELIYVHSKLLIADDNTVIIGSANINDRSMLGKRDSEMAVIVQDTETV 937
            |||..||.|:.|....:|||||||||||||||..||.||||||||||:||||||:|.|:.|.|..
  Fly  1158 ISFHSLRNHSFLNNTPITELIYVHSKLLIADDRVVICGSANINDRSMIGKRDSEIAAILMDEEFE 1222

Human   938 PSVMDGKEYQAGRFARGLRLQCFRVVLGYLDDPSE-----DIQDPVSDKFFKEVWVSTAARNATI 997
            ...|:||:|.:|.||..||...|:..||.|:....     ||.|||.:||:...|...:.:|..|
  Fly  1223 DGRMNGKKYPSGVFAGRLRKYLFKEHLGLLESEGSSRSDLDINDPVCEKFWHGTWRRISMQNTEI 1287

Human   998 YDKVFRCLPNDEVHNLIQLRDFINKPVLAKEDPIRAEEELKKIRGFLVQFPFYFLSEESLLPSVG 1062
            ||:||:|:|.|.|.....||.:..:|.|||..|..|......|:|:||..|..||::|.|.|...
  Fly  1288 YDEVFKCIPTDFVKTFASLRKYQEEPPLAKTAPDLAANRANDIQGYLVDLPLEFLNKEVLTPPGT 1352

Human  1063 TKEAIVPMEVWT 1074
            :||.::|..|||
  Fly  1353 SKEGLIPTSVWT 1364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PLD1NP_002653.1 PLN03008 82..1059 CDD:331186 430/1162 (37%)
Catalytic 463..928 213/557 (38%)
PldNP_001137610.1 PX_PLD 230..431 CDD:132805 53/201 (26%)
PH_PLD 419..564 CDD:269956 45/145 (31%)
PLDc_vPLD1_2_yPLD_like_1 590..734 CDD:197236 94/144 (65%)
PLDc_vPLD1_2_yPLD_like_2 1032..1220 CDD:197239 99/188 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165152691
Domainoid 1 1.000 176 1.000 Domainoid score I3627
eggNOG 1 0.900 - - E1_COG1502
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 788 1.000 Inparanoid score I523
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58673
OrthoDB 1 1.010 - - D330134at33208
OrthoFinder 1 1.000 - - FOG0001475
OrthoInspector 1 1.000 - - otm41338
orthoMCL 1 0.900 - - OOG6_100567
Panther 1 1.100 - - LDO PTHR18896
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2299
SonicParanoid 1 1.000 - - X1041
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.800

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