Sequence 1: | XP_024306066.1 | Gene: | PKD1 / 5310 | HGNCID: | 9008 | Length: | 4343 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001286640.1 | Gene: | Lrt / 37342 | FlyBaseID: | FBgn0034540 | Length: | 830 | Species: | Drosophila melanogaster |
Alignment Length: | 202 | Identity: | 58/202 - (28%) |
---|---|---|---|
Similarity: | 93/202 - (46%) | Gaps: | 16/202 - (7%) |
- Green bases have known domain annotations that are detailed below.
Human 44 GAACRVNCSGRGLRTLGPA-LRIPADATALDVSHNLLRALDVGLLANLSALAELDISNNKISTLE 107
Human 108 EGIFANLFNLSEINLSGNPFECDCGLAWLPRWAEEQQVRVVQPEAATCAGPGSLAGQPLLGIPLL 172
Human 173 DSGCGEEYVACLPDNSS-----GTVAAVSFSAAHEGLLQPEACSAFCFSTGQGLAA-----LSEQ 227
Human 228 GWCLCGA 234 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
PKD1 | XP_024306066.1 | LRR | <50..>126 | CDD:227223 | 23/76 (30%) |
leucine-rich repeat | 70..92 | CDD:275378 | 12/21 (57%) | ||
leucine-rich repeat | 93..116 | CDD:275378 | 6/22 (27%) | ||
PCC | 97..2768 | CDD:188093 | 37/148 (25%) | ||
leucine-rich repeat | 117..129 | CDD:275378 | 3/11 (27%) | ||
GPS | 3051..3100 | CDD:197639 | |||
PLAT_polycystin | 3158..3277 | CDD:238850 | |||
PKD_channel | 3751..4153 | CDD:332708 | |||
Lrt | NP_001286640.1 | LRR_RI | <151..334 | CDD:238064 | |
leucine-rich repeat | 179..199 | CDD:275378 | |||
leucine-rich repeat | 200..223 | CDD:275380 | |||
leucine-rich repeat | 225..248 | CDD:275380 | |||
LRR_8 | 249..307 | CDD:290566 | |||
leucine-rich repeat | 249..272 | CDD:275380 | |||
LRR_RI | <270..479 | CDD:238064 | 27/84 (32%) | ||
leucine-rich repeat | 273..296 | CDD:275380 | |||
leucine-rich repeat | 297..322 | CDD:275380 | |||
LRR_8 | 322..382 | CDD:290566 | |||
leucine-rich repeat | 323..347 | CDD:275380 | |||
leucine-rich repeat | 348..371 | CDD:275380 | |||
LRR_8 | 370..428 | CDD:290566 | 9/33 (27%) |