Sequence 1: | XP_024306066.1 | Gene: | PKD1 / 5310 | HGNCID: | 9008 | Length: | 4343 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_609561.2 | Gene: | Pkd2 / 34651 | FlyBaseID: | FBgn0041195 | Length: | 924 | Species: | Drosophila melanogaster |
Alignment Length: | 547 | Identity: | 116/547 - (21%) |
---|---|---|---|
Similarity: | 200/547 - (36%) | Gaps: | 115/547 - (21%) |
- Green bases have known domain annotations that are detailed below.
Human 3784 LGPPRLRQVRL-QEALYPDPPGPR-VHTCSAAGGFSTSDYDVGWES---PHNGSGTWAYSAP--- 3840
Human 3841 --DLLGAWSWGSCAVYDSGGYVQELGLSLEESRDR----LRFLQLHNWLDNRSRAVFLELTRYSP 3899
Human 3900 AVGLHAAVTLRLEFPAAGRALAALSVRPFALRRLSAGLSLPLLTSVCLL--LFAVHFAVAEARTW 3962
Human 3963 HRE-------------------GRWRVLRLGAWARWLLVALTAATALVRLAQLGAADRQWTRFVR 4008
Human 4009 GRPRRFTSFDQVAQLSSAARGLAASLLFLLLVKAAQQLRFVRQWSVFGKTLCRALPELLGVTLGL 4073
Human 4074 VVLGVAYAQLAILLVS-------SCVDSLWSVAQALLVLCPGTGLSTLCPAESWHLSPLLCVGLW 4131
Human 4132 ALRLWGALRLGAVILRWRYHALRGELYRPAWEPQDYEMVELFLRRLRLWMGLSKVKEFRHKVRFE 4196
Human 4197 GMEPLPSRSSRGSK-VSPDVPPPSAGSDASHP----STSSSQL------DGLSVSLGRLGTRCEP 4250
Human 4251 EPSRLQAVFEALLTQFDRLNQATEDVY 4277 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
PKD1 | XP_024306066.1 | LRR | <50..>126 | CDD:227223 | |
leucine-rich repeat | 70..92 | CDD:275378 | |||
leucine-rich repeat | 93..116 | CDD:275378 | |||
PCC | 97..2768 | CDD:188093 | |||
leucine-rich repeat | 117..129 | CDD:275378 | |||
GPS | 3051..3100 | CDD:197639 | |||
PLAT_polycystin | 3158..3277 | CDD:238850 | |||
PKD_channel | 3751..4153 | CDD:332708 | 89/410 (22%) | ||
Pkd2 | NP_609561.2 | PKD_channel | 402..803 | CDD:285288 | 89/410 (22%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165151821 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3599 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.740 |