DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PITX3 and gsb

DIOPT Version :10

Sequence 1:NP_005020.1 Gene:PITX3 / 5309 HGNCID:9006 Length:302 Species:Homo sapiens
Sequence 2:NP_523863.1 Gene:gsb / 38005 FlyBaseID:FBgn0001148 Length:427 Species:Drosophila melanogaster


Alignment Length:270 Identity:86/270 - (31%)
Similarity:114/270 - (42%) Gaps:47/270 - (17%)


- Green bases have known domain annotations that are detailed below.


Human    32 GCKGQEHSDSEKASASLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 96
            |..|.|....:.|..|:        .||:||||.||.|::.|:..||..|.|.:|||:.||||:|
  Fly   163 GSVGSEDESEDDAEPSV--------QLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELA 219

Human    97 VWTNLTEARVRVWFKNRRAKWRKRERSQQAELCKGSF--------AAPLGGLVPPYEEVYPGYSY 153
            ..|.||||||:|||.||||:.||:..:||..    ||        |.|.....|........||.
  Fly   220 QSTGLTEARVQVWFSNRRARLRKQLNTQQVP----SFAPTSTSFGATPTTSAAPAPNMGMSLYSS 280

Human   154 GNWPPKALAPPLAAKTFPFAFNSVNVGPLASQPVFSPPSSIAASMVPSAAAAPGTVPGPGALQGL 218
            .:||........||    :..:..::.|.:|.   |..||.|.|.|.:.|..|||  |...:...
  Fly   281 QSWPSSGAYENHAA----YGGSVASMSPASST---SGTSSAAHSPVQTQAQQPGT--GSEFMTST 336

Human   219 GGGPPGLAPAAVSSGAVSCPYASAAAAAAAAASSPYVYRDPCNSSLASLRLKAKQHA----SFSY 279
            .|  .|.:.|...|.|.|.|...|.:|            :...|..||.......|.    |:::
  Fly   337 YG--VGSSNATYPSAAYSMPQTPATSA------------EQLRSQFASAAASGSHHPSTWDSYNF 387

Human   280 PAVHGPPPAA 289
            .....||.:|
  Fly   388 AGSFFPPASA 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PITX3NP_005020.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..71 14/38 (37%)
Homeodomain 63..119 CDD:459649 32/55 (58%)
OAR 258..275 CDD:461067 3/16 (19%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 262..275 3/12 (25%)
Nuclear localization signal. /evidence=ECO:0000255 268..272 0/3 (0%)
gsbNP_523863.1 PAX 19..143 CDD:128645
Homeodomain 186..242 CDD:459649 32/55 (58%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.