DRSC/TRiP Functional Genomics Resources

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Protein Alignment PITX2 and Scr

DIOPT Version :10

Sequence 1:NP_000316.2 Gene:PITX2 / 5308 HGNCID:9005 Length:324 Species:Homo sapiens
Sequence 2:NP_001368995.1 Gene:Scr / 40833 FlyBaseID:FBgn0003339 Length:564 Species:Drosophila melanogaster


Alignment Length:234 Identity:62/234 - (26%)
Similarity:91/234 - (38%) Gaps:64/234 - (27%)


- Green bases have known domain annotations that are detailed below.


Human    60 SDTSSPEAAEKDKSQQGKNEDVGAEDPSK----KKR-------------QRRQRTHFTSQQLQEL 107
            ||:.|....|...||...|   |.::|.:    .||             .:||||.:|..|..||
  Fly   278 SDSESDSGNEAGSSQNSGN---GKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLEL 339

Human   108 EATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGPQFNGLMQ 172
            |..|..|||.....|.|||....|||.::::||:|||.||:|..:.....:.....||..:    
  Fly   340 EKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMGPYGH---- 400

Human   173 PYD--DMYPGY-----SYNNWAAKGL-------------TSASLSTKSFPFFNSMNVNPLSSQSM 217
            ||.  |::|..     :.:.|...|.             |:|:.|..|  .:.|.:..|:...|:
  Fly   401 PYHQFDIHPSQFAHLSAXDAWHFSGTGXRLNQLYQEPYQTAAAASAAS--GYQSQDGGPIGGGSV 463

Human   218 ------------------FSPPNSISSMSMSSSMVPSAV 238
                              .|.|||:.:.:.|||..|..:
  Fly   464 GVGGGAGGPGSLANGGSNGSGPNSLFASAASSSQAPDCI 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PITX2NP_000316.2 Homeodomain 93..149 CDD:459649 27/55 (49%)
OAR 282..299 CDD:461067
ScrNP_001368995.1 Homeodomain 325..381 CDD:459649 27/55 (49%)
Blue background indicates that the domain is not in the aligned region.

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