DRSC/TRiP Functional Genomics Resources

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Protein Alignment PITX2 and gsb-n

DIOPT Version :10

Sequence 1:NP_000316.2 Gene:PITX2 / 5308 HGNCID:9005 Length:324 Species:Homo sapiens
Sequence 2:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster


Alignment Length:321 Identity:84/321 - (26%)
Similarity:128/321 - (39%) Gaps:93/321 - (28%)


- Green bases have known domain annotations that are detailed below.


Human    60 SDTSSPEAAEKDKSQQ----GKNEDVGAEDPSK----KKRQRRQRTHFTSQQLQELEATFQRNRY 116
            ||..| |...||.:..    |::.|:...:...    |::|||.||.||::||:.||..|.|.:|
  Fly   143 SDRGS-EDGRKDYTINGILGGRDSDISDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFSRTQY 206

Human   117 PDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGPQFNGLMQPYDDMYPGY 181
            ||:.||||:|..|.|||||::|||.||||:.||.....     .:|..|..:|            
  Fly   207 PDVYTREELAQTTALTEARIQVWFSNRRARLRKHSGGS-----NSGLSPMNSG------------ 254

Human   182 SYNNWAAKGLTSASLSTKSFPFFNSMNVNPLSSQSM--FSP---------------------PNS 223
            |.|.....||:.|:.         .:...||...||  :||                     |:|
  Fly   255 SSNVGVGVGLSGATA---------PLGYGPLGVGSMAGYSPAPGTTATGAGMNDGVHHAAHAPSS 310

Human   224 ISSMSMSSS------------MVPSAVT-GVPGS-----------------SLNSLNNLNNLSSP 258
            ..|.:.:::            :|.||.. |.||.                 |..::::.:.|::.
  Fly   311 HHSAATAAAAAHHHTQMGGYDLVQSAAQHGFPGGFAQPGHFGSQNYYHQDYSKLTIDDFSKLTAD 375

Human   259 SLNSAVPT--PACPYAPPTPPYVYRDTCNSSLASLRLKAKQHSSFGYASVQ---NPASNLS 314
            |::...|:  .:..|:....|..:......:.|:......||....||:..   ||||..|
  Fly   376 SVSKISPSLHLSDNYSKLEAPSNWSQAAYHAAANYNAHVAQHQLNDYAAAAAHGNPASAYS 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PITX2NP_000316.2 Homeodomain 93..149 CDD:459649 33/55 (60%)
OAR 282..299 CDD:461067 2/16 (13%)
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199
Homeodomain 183..239 CDD:459649 33/55 (60%)
Blue background indicates that the domain is not in the aligned region.

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