DRSC/TRiP Functional Genomics Resources

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Protein Alignment PITX2 and Rx

DIOPT Version :10

Sequence 1:NP_000316.2 Gene:PITX2 / 5308 HGNCID:9005 Length:324 Species:Homo sapiens
Sequence 2:NP_726006.3 Gene:Rx / 37367 FlyBaseID:FBgn0020617 Length:904 Species:Drosophila melanogaster


Alignment Length:493 Identity:114/493 - (23%)
Similarity:174/493 - (35%) Gaps:216/493 - (43%)


- Green bases have known domain annotations that are detailed below.


Human     5 KGPLHLEHRAAGTKLSAVSSSSCHHPQPLAMASVLAPG-----QPRSLDSSKHRLEVH------- 57
            :|.|..:.::||.        .|...:| .:|:...||     :|||::...|:.:.|       
  Fly   417 RGQLAAKRKSAGV--------FCDDNEP-KLANGQLPGGNYGIRPRSMEEVHHQQQSHHHQQQQQ 472

Human    58 ----------------------------------------TISDT-------SSPEAAEKDKSQQ 75
                                                    ..||:       ||.:..:.:.|:|
  Fly   473 QQQQQQQLQQQQGFQHDFRNSGNGNPNGNSNSGDHGERLNADSDSLVNGSCASSEDLNQTNSSEQ 537

Human    76 GK-----NEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEAR 135
            |:     ::|.|.:|...||:.||.||.||:.||.|||..|:::.|||:.:|||:|:..||.|.|
  Fly   538 GEKITSGSDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVR 602

Human   136 VRVWFKNRRAKWRKRERNQQAELCKNGF-------GPQFNGL-MQPY----------------DD 176
            |:|||:|||||||::|:::...|....|       |...:|| :.|:                ..
  Fly   603 VQVWFQNRRAKWRRQEKSESLRLGLTHFTQLPHRLGCGASGLPVDPWLSPPLLSALPGFLSHPQT 667

Human   177 MYPGYSYN--NWAAKGLTSASLS------------------------------------------ 197
            :||.|...  :.|...||.:||:                                          
  Fly   668 VYPSYLTPPLSLAPGNLTMSSLAAMGHHHAHNGPPPPHVGHGGHGQPQPPPPPPPHGVPHPHGSH 732

Human   198 ------------TKSFPFFNSM-----NVNPLSSQSMFS-PPNSI-------SSMSMSSS----- 232
                        ::..|...|:     .|.||.:....| ||:|.       ||.|.|||     
  Fly   733 HVVPLSHLSPHLSRMSPHATSLGSPHHGVTPLGTPLHSSLPPSSTATTVAVSSSQSSSSSASLEC 797

Human   233 ------MVP-----------------------SAVTGVPGSSLNSLNNLNNLSSPSLNSAVPTPA 268
                  |.|                       .:.:..|||||:......|:....:....|.| 
  Fly   798 SGPDVCMSPQNLSIGNADSNGDGRDLSSDLDAGSTSSNPGSSLDKCAASANIELLDVGRDSPPP- 861

Human   269 CPYAPP--------TPPYVYRDTCNSSLASLRLKAKQH 298
                ||        |||   .|..::|:|:||:|||:|
  Fly   862 ----PPTPTGKGSSTPP---TDMRSNSIATLRIKAKEH 892

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PITX2NP_000316.2 Homeodomain 93..149 CDD:459649 33/55 (60%)
OAR 282..299 CDD:461067 9/17 (53%)
RxNP_726006.3 Homeodomain 560..616 CDD:459649 33/55 (60%)
OAR 876..892 CDD:461067 8/15 (53%)

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