DRSC/TRiP Functional Genomics Resources

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Protein Alignment PITX2 and cad

DIOPT Version :10

Sequence 1:NP_000316.2 Gene:PITX2 / 5308 HGNCID:9005 Length:324 Species:Homo sapiens
Sequence 2:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster


Alignment Length:288 Identity:63/288 - (21%)
Similarity:100/288 - (34%) Gaps:96/288 - (33%)


- Green bases have known domain annotations that are detailed below.


Human     7 PLHLEHRAAGTKLSAVSSSSCHHPQPLAMASVLAPGQPRSLDSSKHRLEVH-------------- 57
            |.|.:|.|.|.....::.|.         :.:.:||.|.|..|..|.|..|              
  Fly   168 PNHQQHIAEGLPSPPITVSG---------SEISSPGAPTSASSPHHHLAHHLSAVANNNNNNNNN 223

Human    58 --------------TISDTSS-----------------PEAAEKDKSQQGKNEDVG-AEDPSKKK 90
                          ::|:.:.                 |...:.|.|.....||:. ..|.|.|.
  Fly   224 NNSPSTHNNNNNNNSVSNNNRTSPSKPPYFDWMKKPAYPAQPQPDLSSSPNLEDLSDLLDASGKT 288

Human    91 RQR-RQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQ 154
            |.: :.|..:|..|..|||..:..:||..:..:.|:|...:|:|.:|::||:|||||.||:.   
  Fly   289 RTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQN--- 350

Human   155 QAELCKNGFGPQFNGLMQPYDDMYPGYSYNNWAAKGLTSASLSTKSFPFFNSMNVNPLSSQSMFS 219
                 |.|..|...|:                   |:..|..|            ..|.:::...
  Fly   351 -----KKGSDPNVMGV-------------------GVQHADYS------------QLLDAKAKLE 379

Human   220 PPNSISSMSMSSSMVPSAVTGVPGSSLN 247
            |...:|. |::.||.|.|...:|...|:
  Fly   380 PGLHLSH-SLAHSMNPMAAMNIPAMRLH 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PITX2NP_000316.2 Homeodomain 93..149 CDD:459649 20/56 (36%)
OAR 282..299 CDD:461067
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 20/54 (37%)
Blue background indicates that the domain is not in the aligned region.

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