DRSC/TRiP Functional Genomics Resources

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Protein Alignment PITX2 and Vsx1

DIOPT Version :10

Sequence 1:NP_000316.2 Gene:PITX2 / 5308 HGNCID:9005 Length:324 Species:Homo sapiens
Sequence 2:NP_572232.2 Gene:Vsx1 / 31470 FlyBaseID:FBgn0263511 Length:837 Species:Drosophila melanogaster


Alignment Length:260 Identity:78/260 - (30%)
Similarity:104/260 - (40%) Gaps:61/260 - (23%)


- Green bases have known domain annotations that are detailed below.


Human     9 HLEHRAAGTKLSAVSSSSCHHPQPLAMASVLAPGQPRSLDSSKHRLEVHTISDTSSPEAAEKDKS 73
            |..|.|......|      ||.:....|:..|.|.|.||      |..|.......|        
  Fly   338 HAAHAAHAAHAHA------HHAEAFLGAAGGAGGNPNSL------LAAHGGDVLVGP-------- 382

Human    74 QQGKNEDVGAEDPSKKKRQRRQ--RTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARV 136
                    |...|..||:.:|:  ||.|||.||:|||..|:...|||:|.||.:::.|.|.|.|:
  Fly   383 --------GGTGPGGKKKNKRRHGRTIFTSSQLEELEKAFKEAHYPDVSARELLSMKTGLAEDRI 439

Human   137 RVWFKNRRAKWRKRER--NQQAELCKNGFGPQFNGLMQPYDDMYP---------GYSYNNWA--- 187
            :||::||||||||.|:  ....::.:.|    ..|.|..:....|         ..|...|.   
  Fly   440 QVWYQNRRAKWRKTEKCWGHSTKMAEYG----LYGAMVRHSLPLPETIIKSAKEDESVAPWLLGM 500

Human   188 -AKGLTSASL-----STKSFPFFNSMNVNPLSSQSMFSPPNS-ISSMSMSSSM--VPSAVTGVPG 243
             .|.|.:|.|     |.:..|..:..|    :|.|..|..|| |||.|:|..:  .|....|..|
  Fly   501 HKKSLEAAELLKSDESDRETPTSDDTN----TSYSAGSTHNSPISSFSISRLLFDAPPPAAGSAG 561

Human   244  243
              Fly   562  561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PITX2NP_000316.2 Homeodomain 93..149 CDD:459649 30/57 (53%)
OAR 282..299 CDD:461067
Vsx1NP_572232.2 Homeodomain 395..452 CDD:459649 30/56 (54%)
Blue background indicates that the domain is not in the aligned region.

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