DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PITX1 and hbn

DIOPT Version :10

Sequence 1:XP_047273274.1 Gene:PITX1 / 5307 HGNCID:9004 Length:348 Species:Homo sapiens
Sequence 2:NP_788420.1 Gene:hbn / 47894 FlyBaseID:FBgn0008636 Length:409 Species:Drosophila melanogaster


Alignment Length:354 Identity:94/354 - (26%)
Similarity:145/354 - (40%) Gaps:79/354 - (22%)


- Green bases have known domain annotations that are detailed below.


Human    20 RPAPAPGAPAAVPT---SMDAFKGGM-SLER--LPEGL---RPPPPPPH--------DMGPAFHL 67
            ||||...:|.:.|.   |:|...|.. .::|  .|..:   .|....||        :...:.||
  Fly    21 RPAPVQESPVSRPRAVYSIDQILGNQHQIKRSDTPSEVLITHPHHGHPHHIHHLHSSNSNGSNHL 85

Human    68 ARPADPREPLENSASESSD-----------TELPEKERGGEPKGPEDSGAGGTGCG-GADDPAKK 120
            :.....:...:...|:...           .:.|....||.....:|..:.....| ...|..:.
  Fly    86 SHQQQQQHSQQQHHSQQQQQQQQLQVQAKREDSPTNTDGGLDVDNDDELSSSLNNGHDLSDMERP 150

Human   121 KKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQ 185
            :|.||.||.||:.||.:||..|::.:|||:..||::|:..:|:|.||:|||:||||||||||:..
  Fly   151 RKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRKREKFM 215

Human   186 QLDLCKGGY------VPQFS-GLVQP---------------YEDVYAAGYSYNNWAAKS--LAPA 226
            ..|  |.||      :|:|. |:..|               :...:|....:|..||.:  |.|.
  Fly   216 NQD--KAGYLLPEQGLPEFPLGIPLPPHGLPGHPGSMQSEFWPPHFALHQHFNPAAAAAAGLLPQ 278

Human   227 PLSTKSFTFFNSMSPLSSQSMFSAPSSISSMTMPSSMGPGAV-------PGMP-----NSGLNNI 279
            .|....:...|..:.||.....|..:.|        .|.||.       .|.|     ::||:.:
  Fly   279 HLMAPHYKLPNFHTLLSQYMGLSNLNGI--------FGAGAAAAAAAASAGYPQNLSLHAGLSAM 335

Human   280 NNLTGSSLNSA--MSPGACPYGTP--ASP 304
            :.::....||:  .||...|:.||  |:|
  Fly   336 SQVSPPCSNSSPRESPKLVPHPTPPHATP 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PITX1XP_047273274.1 Homeodomain 124..180 CDD:459649 30/55 (55%)
OAR 310..327 CDD:461067
hbnNP_788420.1 Homeodomain 154..210 CDD:459649 30/55 (55%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.