DRSC/TRiP Functional Genomics Resources

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Protein Alignment PITX1 and cad

DIOPT Version :10

Sequence 1:XP_047273274.1 Gene:PITX1 / 5307 HGNCID:9004 Length:348 Species:Homo sapiens
Sequence 2:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster


Alignment Length:278 Identity:62/278 - (22%)
Similarity:103/278 - (37%) Gaps:64/278 - (23%)


- Green bases have known domain annotations that are detailed below.


Human    11 LGRSQGGGARPAPAPGAPAAVPTSMDAFKGGMSLERLPEGLRPPP------------PPPHDMGP 63
            :|.:.|||.......|.|.:.|.:..        :.:.|||..||            .|.....|
  Fly   146 VGGAGGGGGVGGATDGGPGSAPPNHQ--------QHIAEGLPSPPITVSGSEISSPGAPTSASSP 202

Human    64 AFHLAR------------------PADPREPLENSASESSDTELPEK-------ERGGEPKGPED 103
            ..|||.                  |:.......|::..:::...|.|       ::...|..|:.
  Fly   203 HHHLAHHLSAVANNNNNNNNNNNSPSTHNNNNNNNSVSNNNRTSPSKPPYFDWMKKPAYPAQPQP 267

Human   104 SGAGGTGCGGADD----PAKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTE 164
            ..:.........|    ..|.:.:.:.|..:|..|..|||..:..:||..:..:.|:|...:|:|
  Fly   268 DLSSSPNLEDLSDLLDASGKTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSE 332

Human   165 PRVRVWFKNRRAKWRKRERNQQLDLCKGGYVPQFSGLVQPYEDVYAAGYSYNNWAAKSLAPAPLS 229
            .:|::||:|||||.||:.        |.|..|...|:     .|..|.||....|...|.|.  .
  Fly   333 RQVKIWFQNRRAKERKQN--------KKGSDPNVMGV-----GVQHADYSQLLDAKAKLEPG--L 382

Human   230 TKSFTFFNSMSPLSSQSM 247
            ..|.:..:||:|:::.::
  Fly   383 HLSHSLAHSMNPMAAMNI 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PITX1XP_047273274.1 Homeodomain 124..180 CDD:459649 20/55 (36%)
OAR 310..327 CDD:461067
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 20/54 (37%)
Blue background indicates that the domain is not in the aligned region.

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