DRSC/TRiP Functional Genomics Resources

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Protein Alignment PITX1 and Gsc

DIOPT Version :10

Sequence 1:XP_047273274.1 Gene:PITX1 / 5307 HGNCID:9004 Length:348 Species:Homo sapiens
Sequence 2:NP_001137762.2 Gene:Gsc / 33240 FlyBaseID:FBgn0010323 Length:473 Species:Drosophila melanogaster


Alignment Length:296 Identity:81/296 - (27%)
Similarity:110/296 - (37%) Gaps:100/296 - (33%)


- Green bases have known domain annotations that are detailed below.


Human    13 RSQGGGARPAPAPGAPAAVPTSMDAF-KGGMSLERLPEG-------------------LRPPPPP 57
            |.||||.  ||:.|:..:...:.:.. ..|:||.....|                   :||...|
  Fly   173 RQQGGGT--APSQGSHISSNGNQNGLTSNGISLGLKRSGAESPASPNSNSSSSAAASPIRPQRVP 235

Human    58 PHDMGPAFHL------------ARPAD---------PREPLENSASESSDTELPEKERG------ 95
            .....|..||            |.|:|         |......:.:..:..::.....|      
  Fly   236 AMLQHPGLHLGHLAAAAASGFAASPSDFLVAYPNFYPNYMHAAAVAHVAAAQMQAHVSGAAAGLS 300

Human    96 ----------GEPKGPEDSGAGGTG------CGGADDPAKKKKQRRQRTHFTSQQLQELEATFQR 144
                      |.|..|. .||...|      .|....|   |::||.||.||.:||::|||||.:
  Fly   301 GHGHHPHHPHGHPHHPH-LGAHHHGQHHLSHLGHGPPP---KRKRRHRTIFTEEQLEQLEATFDK 361

Human   145 NRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQLDLCK----------GGYVPQFS 199
            ..|||:.:||::|:..:|.|.||.||||||||||||::|.:|..|.|          .|.....|
  Fly   362 THYPDVVLREQLALKVDLKEERVEVWFKNRRAKWRKQKREEQERLRKLQEEQCGSTTNGTTNSSS 426

Human   200 GLVQ-----------PYEDVYAA----------GYS 214
            |...           |..|.|:|          |||
  Fly   427 GTTSSTGNGSLTVKCPGSDHYSAQLVHIKSDPNGYS 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PITX1XP_047273274.1 Homeodomain 124..180 CDD:459649 33/55 (60%)
OAR 310..327 CDD:461067
GscNP_001137762.2 Homeodomain 341..397 CDD:459649 33/55 (60%)
Blue background indicates that the domain is not in the aligned region.

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