DRSC/TRiP Functional Genomics Resources

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Protein Alignment PITX1 and Vsx1

DIOPT Version :10

Sequence 1:XP_047273274.1 Gene:PITX1 / 5307 HGNCID:9004 Length:348 Species:Homo sapiens
Sequence 2:NP_572232.2 Gene:Vsx1 / 31470 FlyBaseID:FBgn0263511 Length:837 Species:Drosophila melanogaster


Alignment Length:367 Identity:93/367 - (25%)
Similarity:123/367 - (33%) Gaps:120/367 - (32%)


- Green bases have known domain annotations that are detailed below.


Human     9 GELGR------SQGGGARPAPAPGAPAA----VPTSMDAFKGGMSLERLPEGLRPPPPPPHD--- 60
            |.||.      ..||||....:.|....    ..||.:...||.|      |.|..|..||.   
  Fly   235 GHLGSPTASNGGSGGGAGVGGSGGGSGTSGSNSSTSGNGGNGGSS------GSRSSPAGPHHSAA 293

Human    61 ----------MGPAFHLARPADPREPLENS------------------ASESSDTELPEKE---- 93
                      ...|.|.|..|.......::                  |:.::.......|    
  Fly   294 LAAHQHAAAAAAAAHHHAAAAAAAHHAHHAHAQAHAHAHAHVHAHAAHAAHAAHAHAHHAEAFLG 358

Human    94 ----RGGEPK-------GPEDSGAGGTGCGGADDPAKKKKQRRQRTHFTSQQLQELEATFQRNRY 147
                .||.|.       |....|.||||.||    .||.|:|..||.|||.||:|||..|:...|
  Fly   359 AAGGAGGNPNSLLAAHGGDVLVGPGGTGPGG----KKKNKRRHGRTIFTSSQLEELEKAFKEAHY 419

Human   148 PDMSMREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQLDLCKGGYVPQFSGLVQPYEDVYAAG 212
            ||:|.||.:::.|.|.|.|::||::||||||||.|:      |.|             .....|.
  Fly   420 PDVSARELLSMKTGLAEDRIQVWYQNRRAKWRKTEK------CWG-------------HSTKMAE 465

Human   213 YSYNNWAAKSLAPAPLSTKSFTFFNSMSPLSSQSMFSAPSSISSMTMPSSMGPGAVPGMPNSGLN 277
            |.......:...|.|                       .:.|.|.....|:.|..: ||....|.
  Fly   466 YGLYGAMVRHSLPLP-----------------------ETIIKSAKEDESVAPWLL-GMHKKSLE 506

Human   278 NINNL----------TGSSLNSAMSPGACPYGTPASPYSVYR 309
            ....|          |....|::.|.|: .:.:|.|.:|:.|
  Fly   507 AAELLKSDESDRETPTSDDTNTSYSAGS-THNSPISSFSISR 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PITX1XP_047273274.1 Homeodomain 124..180 CDD:459649 30/55 (55%)
OAR 310..327 CDD:461067 93/367 (25%)
Vsx1NP_572232.2 Homeodomain 395..452 CDD:459649 30/56 (54%)

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