DRSC/TRiP Functional Genomics Resources

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Protein Alignment PITX1 and Vsx2

DIOPT Version :10

Sequence 1:XP_047273274.1 Gene:PITX1 / 5307 HGNCID:9004 Length:348 Species:Homo sapiens
Sequence 2:NP_001284897.1 Gene:Vsx2 / 31469 FlyBaseID:FBgn0263512 Length:645 Species:Drosophila melanogaster


Alignment Length:363 Identity:96/363 - (26%)
Similarity:132/363 - (36%) Gaps:115/363 - (31%)


- Green bases have known domain annotations that are detailed below.


Human    53 PPPPPPHDMGPAFHLARPADPREPLEN--------SASESSDTELPEKERGGEPKGPEDSGAGG- 108
            ||||||..    .|  .|..|..||.:        |.:..:.|.||..      ..|:|.|... 
  Fly   162 PPPPPPMQ----HH--HPHHPHHPLLHAQGFPQLKSFAAGAGTCLPGS------LAPKDFGMESL 214

Human   109 TGCG-GADDPAKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFK 172
            .|.| |.:...||||:|..||.|||.||::||..|:...|||:..||.:::.|.|.|.|::|||:
  Fly   215 NGFGVGPNSKKKKKKRRHSRTIFTSYQLEKLEEAFKEAHYPDVYAREMLSLKTELPEDRIQVWFQ 279

Human   173 NRRAKWRKRER------------------NQQLDL---------CKGGYVPQFSGL--------- 201
            ||||||||.|:                  ...|.|         ......|...|:         
  Fly   280 NRRAKWRKTEKVWGGSTIMAEYGLYGAMVRHSLPLPDTILKSAKDNDAVAPWLLGMEQKCMHRKS 344

Human   202 ------------VQPYEDVYAAGYSYNNWAAKSLAPA-PLSTKSFTFFNSMSPLSSQSMFSAPSS 253
                        |..:||...:..:::...::|...| ..||:|   .|.:||..|    |.|:|
  Fly   345 IEAQSALKDDSGVSDHEDSAGSKSAHSEDLSRSRCHALSSSTES---LNVVSPAPS----SCPTS 402

Human   254 ISSMTMPSSMGPGAVPGMPNSGLNNINNLTG-SSLNSAMSP------------------------ 293
            .|:...|:|     ..|...:..:.....|| |:.||:.||                        
  Fly   403 ASTSAPPTS-----TSGYAGAASSAATTPTGASTTNSSSSPHIELGSPSPQQQQHLQLQQQQQQQ 462

Human   294 -------GACPYGTPASPYSVYRDTCNSSLASLRLKSK 324
                   ||...|.....|....|..|::.|.....||
  Fly   463 ASLYLGAGAVVTGCAPPSYHPLLDAANAAGAGAAASSK 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PITX1XP_047273274.1 Homeodomain 124..180 CDD:459649 29/55 (53%)
OAR 310..327 CDD:461067 5/15 (33%)
Vsx2NP_001284897.1 Homeodomain 230..287 CDD:459649 29/56 (52%)
OAR 556..572 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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