DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PIK3CD and VPS34

DIOPT Version :10

Sequence 1:NP_005017.3 Gene:PIK3CD / 5293 HGNCID:8977 Length:1044 Species:Homo sapiens
Sequence 2:NP_013341.1 Gene:VPS34 / 850941 SGDID:S000004230 Length:875 Species:Saccharomyces cerevisiae


Alignment Length:946 Identity:240/946 - (25%)
Similarity:404/946 - (42%) Gaps:222/946 - (23%)


- Green bases have known domain annotations that are detailed below.


Human   233 VEQPEDYTLQVNGRHEYLYGSYPLCQ-FQYICSCLHSGLTPHLTMVHSSSI--------LAMRDE 288
            |.|..|..|:|  :.:.|.|..||.: .|.|       |.|.|.::.|:..        |.:.|:
Yeast    10 VSQDLDVPLKV--KIKSLEGHKPLLKPSQKI-------LNPELMLIGSNVFPSSDLIVSLQVFDK 65

Human   289 QSNPAPQVQKPRAKP---PPIPAKKPSSVSLWSLEQPFRIELIQGSKVNADERMKLVVQAGLFHG 350
            :.|      :....|   |.||.:...:...| |..|.||:     ::.....:::::..  ::|
Yeast    66 ERN------RNLTLPIYTPYIPFRNSRTWDYW-LTLPIRIK-----QLTFSSHLRIILWE--YNG 116

Human   351 NEMLCKTVSSSEVSVCSEPVWKQRLEFDINICDLPRMARLCFALYAVIEKAKKARSTKKKSKKAD 415
            ::.:  ...:.|.|:           |::..|.|.|........|.||:..:.....|.:.    
Yeast   117 SKQI--PFFNLETSI-----------FNLKDCTLKRGFESLKFRYDVIDHCEVVTDNKDQE---- 164

Human   416 CPIAWANLMLF--------DYKDQLKTG----ERCLYMWPS---------------VPDEKGELL 453
                  ||..:        .:.|::...    :|....||.               |...:.|::
Yeast   165 ------NLNKYFQGEFTRLPWLDEITISKLRKQRENRTWPQGTFVLNLEFPMLELPVVFIEREIM 223

Human   454 NP---TGTVRSNP--NTD------SAAALLICL------------PEVAPHPVYYPALEKILELG 495
            |.   ..|:::||  :||      :...:.|.|            |:   .|...|..||...|.
Yeast   224 NTQMNIPTLKNNPGLSTDLREPNRNDPQIKISLGDKYHSTLKFYDPD---QPNNDPIEEKYRRLE 285

Human   496 RHSECVHVTEE------EQLQLREILERRGSGELYEHEKDLVWKLRHEVQEHFPEALARLLLVTK 554
            |.|:..::.::      ::..|.:|:......:|..|||..:||.|:.:..: .:||.:||..|.
Yeast   286 RASKNANLDKQVKPDIKKRDYLNKIINYPPGTKLTAHEKGSIWKYRYYLMNN-KKALTKLLQSTN 349

Human   555 WNKHEDVAQMLYLLCSWPELPVLSALELLDFSFPDCHVGSFAIKSLRKLTDDELFQYLLQLVQVL 619
            ..:..:..::|.|:.||.|:.:..|||||..:|.:..|.|:|:..|:|.:|.||..||||||:.:
Yeast   350 LREESERVEVLELMDSWAEIDIDDALELLGSTFKNLSVRSYAVNRLKKASDKELELYLLQLVEAV 414

Human   620 KYE---------------------------------SYLDCELTK-------------------- 631
            .:|                                 |:.:.:|.|                    
Yeast   415 CFENLSTFSDKSNSEFTIVDAVSSQKLSGDSMLLSTSHANQKLLKSISSESETSGTESLPIVISP 479

Human   632 ---FLLDRALANRKIGHFLFWHLRSEM----HVPSVALRFGLILEAYCRGSTHHMKVLMKQGEAL 689
               ||:.|||.|.::|.|.:|:|:||.    ::..:...|...|:...|      .:|..|...:
Yeast   480 LAEFLIRRALVNPRLGSFFYWYLKSESEDKPYLDQILSSFWSRLDKKSR------NILNDQVRLI 538

Human   690 SKLKALNDFVKLSSQKTPKPQTKELMHLCMRQEAYLEALSHLQSPLDPSTLLAEVCVEQCTFMDS 754
            :.|:...:.:|.....|.| :.:.|:||...:...|..:..:..||||..|:.:||.|......|
Yeast   539 NVLRECCETIKRLKDTTAK-KMELLVHLLETKVRPLVKVRPIALPLDPDVLICDVCPETSKVFKS 602

Human   755 KMKPLWIMYS---NEEAGSGGSVGIIFKNGDDLRQDMLTLQMIQLMDVLWKQEGLDLRMTPYGCL 816
            .:.||.|.:.   |:      ...::||.|||||||.|.:|:|.||:.|.|.|.:||::|||..|
Yeast   603 SLSPLKITFKTTLNQ------PYHLMFKVGDDLRQDQLVVQIISLMNELLKNENVDLKLTPYKIL 661

Human   817 PTGDRTGLIEVVLRSDTIANIQLNKSNMAATAAFNKDALLNWLKSKNPGEALDRAI-----EEFT 876
            .||.:.|.||.: .:||:|:| |:|.:          .:|.:||...|.|.....:     :.|.
Yeast   662 ATGPQEGAIEFI-PNDTLASI-LSKYH----------GILGYLKLHYPDENATLGVQGWVLDNFV 714

Human   877 LSCAGYCVATYVLGIGDRHSDNIMIRESGQLFHIDFGHFLGNFKTKFGINRERVPFILTYDFVHV 941
            .|||||||.||:||:||||.||:::...|..||.|||:.||.....|....:..|        .:
Yeast   715 KSCAGYCVITYILGVGDRHLDNLLVTPDGHFFHADFGYILGQDPKPFPPLMKLPP--------QI 771

Human   942 IQQGKTNNSEKFERFRGYCERAYTILRRHGLLFLHLFALMRAAGLPELSCSKD--IQYLKDSLAL 1004
            |:......|..:::||.||..||:||||:..|.|:||.||:.:.:|::....:  |..:::...|
Yeast   772 IEAFGGAESSNYDKFRSYCFVAYSILRRNAGLILNLFELMKTSNIPDIRIDPNGAILRVRERFNL 836

Human  1005 GKTEEEALKHFRVKFNEALRESWKTKVNWLAHNVSK 1040
            ..:||:|..||:...|:::.......::.| ||:::
Yeast   837 NMSEEDATVHFQNLINDSVNALLPIVIDHL-HNLAQ 871

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PIK3CDNP_005017.3 PI3K_p85B 34..107 CDD:460483
PI3K_rbd 175..281 CDD:395642 15/48 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 287..312 6/27 (22%)
C2_PI3K_class_I_beta_delta 314..481 CDD:176075 33/216 (15%)
PI3Ka 503..684 CDD:214537 59/246 (24%)
PI3Kc_IA_delta 676..1042 CDD:270718 120/375 (32%)
G-loop. /evidence=ECO:0000255|PROSITE-ProRule:PRU00269 751..757 1/5 (20%)
Catalytic loop. /evidence=ECO:0000255|PROSITE-ProRule:PRU00269 890..898 5/7 (71%)
Activation loop. /evidence=ECO:0000255|PROSITE-ProRule:PRU00269 909..935 8/25 (32%)
VPS34NP_013341.1 TEL1 <1..872 CDD:227365 240/946 (25%)
PI3Kc_III 528..871 CDD:270628 121/376 (32%)
Blue background indicates that the domain is not in the aligned region.

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