DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATP6V1C1 and Atp6v1c1

DIOPT Version :10

Sequence 1:NP_001686.1 Gene:ATP6V1C1 / 528 HGNCID:856 Length:382 Species:Homo sapiens
Sequence 2:NP_079770.2 Gene:Atp6v1c1 / 66335 MGIID:1913585 Length:382 Species:Mus musculus


Alignment Length:430 Identity:83/430 - (19%)
Similarity:152/430 - (35%) Gaps:138/430 - (32%)


- Green bases have known domain annotations that are detailed below.


Human   157 KIPEVDMARVVAPFMSNIPLLLYPQDHPRSQPQPKANEDV-CQDCMKLV------SDVQTAVKTN 214
            :||.||:...:.|                 .|.|...:|: .:|.::.:      |||...|:..
Mouse   185 RIPNVDLRFFLPP-----------------PPLPHTEDDISIEDGLRQLLASLPQSDVDQCVQYF 232

Human   215 SSFIQGFVDHVKEDCDRLG--------------PGVSDICKNYVDQYSEVCVQMLM-HMQPKEIC 264
            :|..      ::|....|.              |....:.....::....|:|.|: |.:.:..|
Mouse   233 TSLA------LRESSQSLASQRGGLWCFGGNGLPYAQSLTSTPSEKVETFCLQALVQHSKVRSHC 291

Human   265 ---VLAGFCNEVKRV-PMKTLVPATETIKNILPALEMMDPYENLVQAHNVILCQTCQFVMNKFSE 325
               |..|....::|| .::...|..:  :||:..:..:...|||   |..|:....   |:..:|
Mouse   292 EHIVANGGLQLLQRVYQLRRDSPKIQ--RNIVRIIGNLALNENL---HTTIVQSGW---MSVLAE 348

Human   326 LI----VNNATEELLVKGLSNACALLPDPARTKCQEVV-------GTFGPSLLDI-FIHEVNPSS 378
            :|    :..|:.  ..:.|:|   |..|..|.|.|:.|       .|..|...|: |:|      
Mouse   349 MIQSPHIMQASH--AARALAN---LDRDAVRQKYQDGVYILHPQCRTNQPIKADVLFVH------ 402

Human   379 LCGVIG------------------LCAARPELVE-------ALEQPAPAIVSALLKEPT-----P 413
              |::|                  |...|.:..|       |.:.|...|:|  ::..|     .
Mouse   403 --GLLGAAFKTWRQKDCDVTDDEKLEGVREDYTECWPKSWLAADCPNLRILS--VEYDTHLSDWN 463

Human   414 PKQPAQPKQSALPAH----VPPQKNGGFCEVCKKLVLYLEHNLEKNSTKEEILAALE-------- 466
            .|.|.:.::.:|...    :...|:.|   |.::.|:::.|::.....|:.:|.|.:        
Mouse   464 SKCPVENQRKSLAFRSQELLRKLKDAG---VGERPVIWVAHSMGGLLVKKMLLDAAKDPDLSSLI 525

Human   467 ---KGCSFLPDPYQKQCDDFVAEYEPLLLEIL---VEVMD 500
               ||..|...|:.   ..|:|||...:..:|   :||.:
Mouse   526 KNTKGILFYSVPHH---GTFMAEYSVSVRYLLFPSIEVKE 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATP6V1C1NP_001686.1 V-ATPase_C 4..370 CDD:460851 49/250 (20%)
3-helical coiled coil 56..76 CDD:270211
3-helical coiled coil 121..147 CDD:270211
3-helical coiled coil 275..306 CDD:270211 8/31 (26%)
Atp6v1c1NP_079770.2 V-ATPase_C 4..370 CDD:460851 41/220 (19%)
3-helical coiled coil 56..76 CDD:270211
3-helical coiled coil 121..147 CDD:270211
3-helical coiled coil 275..306 CDD:270211 7/30 (23%)
Blue background indicates that the domain is not in the aligned region.

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