DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATP6V1C1 and atp6v1c1a

DIOPT Version :9

Sequence 1:NP_001686.1 Gene:ATP6V1C1 / 528 HGNCID:856 Length:382 Species:Homo sapiens
Sequence 2:NP_958479.1 Gene:atp6v1c1a / 368907 ZFINID:ZDB-GENE-030616-612 Length:383 Species:Danio rerio


Alignment Length:383 Identity:338/383 - (88%)
Similarity:362/383 - (94%) Gaps:1/383 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MTEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKLDAFV 65
            |||||||||||||||||||:||..||::.|||:..:|||||||||||||||||||||||||||||
Zfish     1 MTEFWLISAPGEKTCQQTWDKLMTATTRTNNLSTNNKFNIPDLKVGTLDVLVGLSDELAKLDAFV 65

Human    66 EGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVT 130
            |.||||||||||||||||:|||||||||||||||||:|||||||||||||||||||||||:|.|:
Zfish    66 ESVVKKVAQYMADVLEDSRDKVQENLLANGVDLVTYVTRFQWDMAKYPIKQSLKNISEIISKQVS 130

Human   131 QIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHN 195
            |||||||:|||||||||||||||||||||||||||||:||||||||||||||:||||||||.|:.
Zfish   131 QIDNDLKARASAYNNLKGNLQNLERKNAGSLLTRSLADIVKKDDFVLDSEYLITLLVVVPKTNYT 195

Human   196 DWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKARENKFIVRDFQYNEEEMKA 260
            ||.:.||||||||||||:|:|.||.||.|..|||||||:||||||||||||.|||||||||||||
Zfish   196 DWQRTYETLAEMVVPRSTNLLFEDHDSGLFTVTLFRKAIDDFRHKARENKFTVRDFQYNEEEMKA 260

Human   261 DKEEMNRLSTDKKKQFGPLVRWLKVNFSEAFIAWIHVKALRVFVESVLRYGLPVNFQAMLLQPNK 325
            |||||.||||||||||||||||||||||||||||:|:||||||||||||||||||||||||||||
Zfish   261 DKEEMTRLSTDKKKQFGPLVRWLKVNFSEAFIAWVHIKALRVFVESVLRYGLPVNFQAMLLQPNK 325

Human   326 KTLKKLREVLHELYKHLDSSAAAIID-APMDIPGLNLSQQEYYPYVYYKIDCNLLEFK 382
            |.:|||||||::|||||||||||||| :.||||||||||||||||||||||||||:||
Zfish   326 KNMKKLREVLYDLYKHLDSSAAAIIDQSAMDIPGLNLSQQEYYPYVYYKIDCNLLDFK 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATP6V1C1NP_001686.1 V-ATPase_C 5..370 CDD:397366 321/365 (88%)
3-helical coiled coil 56..76 CDD:270211 18/19 (95%)
3-helical coiled coil 121..147 CDD:270211 21/25 (84%)
3-helical coiled coil 275..306 CDD:270211 28/30 (93%)
atp6v1c1aNP_958479.1 V-ATPase_C 5..371 CDD:281248 321/365 (88%)
3-helical coiled coil 56..76 CDD:270211 18/19 (95%)
3-helical coiled coil 121..147 CDD:270211 21/25 (84%)
3-helical coiled coil 275..306 CDD:270211 28/30 (93%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C194341695
Domainoid 1 1.000 648 1.000 Domainoid score I1403
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1281
Inparanoid 1 1.050 677 1.000 Inparanoid score I4489
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG54067
OrthoDB 1 1.010 - - D1016088at2759
OrthoFinder 1 1.000 - - FOG0001981
OrthoInspector 1 1.000 - - oto43522
orthoMCL 1 0.900 - - OOG6_101992
Panther 1 1.100 - - LDO PTHR10137
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1630
SonicParanoid 1 1.000 - - X1294
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 1 1.500 - -
1616.440

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