DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATP6V1C1 and Vha44

DIOPT Version :9

Sequence 1:NP_001686.1 Gene:ATP6V1C1 / 528 HGNCID:856 Length:382 Species:Homo sapiens
Sequence 2:NP_001137679.1 Gene:Vha44 / 36826 FlyBaseID:FBgn0262511 Length:836 Species:Drosophila melanogaster


Alignment Length:831 Identity:247/831 - (29%)
Similarity:316/831 - (38%) Gaps:451/831 - (54%)


- Green bases have known domain annotations that are detailed below.


Human     1 MTEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKLDAFV 65
            |:|:|:|||||:||||||::.::..|||.:||....||:||||||||||.||||||:|.|||.:|
  Fly     2 MSEYWIISAPGDKTCQQTYDTMNNLTSKQHNLCNNYKFHIPDLKVGTLDQLVGLSDDLGKLDTYV 66

Human    66 EGVVKKVAQYMADVLEDSKDKVQENLLANG----------------------------------- 95
            |.:.:|||.|:.:||||.:||:.|||:||.                                   
  Fly    67 EQITRKVANYLGEVLEDQRDKLHENLMANNSPGPPDDSMPCRHHQRIKHLSLRHQRKHQHTHHQN 131

Human    96 ----------------------------------------------------------------- 95
                                                                             
  Fly   132 KPQHYHHHHHHHQLPQDLKGKSAATCSPATPPAPASAPPHLPPACACDVLAPGSLTGGSLTNLST 196

Human    96 ----------------------------------------------------------------- 95
                                                                             
  Fly   197 SHEPEPEFDVCPCDECFACAPPSTSATASTLLADECYSQTASSMLSATRCALSTVAAIATGSGLG 261

Human    96 ----------------------------------------------------------------- 95
                                                                             
  Fly   262 NGPSTSAAAAAAASNSSGGGGGGGPASCSTLCSSAYFSTSAPTTSSSVHSSMSRSNSKRLNNNTC 326

Human    96 ----------------------------------------------------------------- 95
                                                                             
  Fly   327 SINNNKLSFRSGSHVSQLHLATQQPQHHHSHPHQQPHTNPLQSPVQKSMSEDEGDASNAHEDGET 391

Human    96 ----------------------------------------------------------------- 95
                                                                             
  Fly   392 DEDPKSPHSVQSDLSDAFDWWFNKPKRNSKKSSAQQQHETAQLQHQQTTQQHATPLTPQNHNQYQ 456

Human    96 ----------------------------------------------------------------- 95
                                                                             
  Fly   457 NQHLSKAMTFWHQASTTPRSSYRSFFNSLADQIYSKRSTPSQLNINNGFNLTPTHRSSPVSSCCG 521

Human    96 -----------------------VDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLK 137
                                   .:|..|:||||||||||||||||:||::||:|.:.|||.|||
  Fly   522 SSSQGRSSPDTDPAEPPEFPLSPAELPQYLTRFQWDMAKYPIKQSLRNIADIISKQIGQIDGDLK 586

Human   138 SRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYE 202
            :::.|||||||||||||:|..||||||:||::|||:.|:||||||.||||:|||:..|||:..||
  Fly   587 TKSQAYNNLKGNLQNLEKKKTGSLLTRNLADLVKKEHFILDSEYLTTLLVIVPKVMANDWLTNYE 651

Human   203 TLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKARENKFIVRDFQYNEEEMKADKEEMNR 267
            .:.:|:|||||.::.||.|..|.|||||:|..::|:..|||.|||||||.|||||:.|.|.||.:
  Fly   652 KITDMIVPRSSQLIQEDADYCLFNVTLFKKVAEEFKLHARERKFIVRDFVYNEEELAAGKNEMTK 716

Human   268 LSTDKKKQFGPLVRWLKVNFSEAFIAWIHVKALRVFVESVLRYGLPVNFQAMLLQPNKKTLKKLR 332
            |.||||||||||||||||||||||.|.||||||||||||||||||||||||:|::||||::|:||
  Fly   717 LMTDKKKQFGPLVRWLKVNFSEAFCALIHVKALRVFVESVLRYGLPVNFQAILIEPNKKSVKRLR 781

Human   333 EVLHELYKHLDSSAA--AIIDAP-MDIPGLNLSQQEYYPYVYYKIDCNLLE 380
            :||::||.|||.::|  |:..|. :|||||...|.||:|||:||::.:::|
  Fly   782 DVLNQLYGHLDGASAGGAVSSADNVDIPGLGFGQSEYFPYVFYKVNIDMVE 832

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATP6V1C1NP_001686.1 V-ATPase_C 5..370 CDD:397366 240/815 (29%)
3-helical coiled coil 56..76 CDD:270211 10/19 (53%)
3-helical coiled coil 121..147 CDD:270211 14/25 (56%)
3-helical coiled coil 275..306 CDD:270211 28/30 (93%)
Vha44NP_001137679.1 V-ATPase_C 6..>98 CDD:301617 56/91 (62%)
3-helical coiled coil 57..77 CDD:270211 10/19 (53%)
V-ATPase_C <547..822 CDD:281248 184/274 (67%)
3-helical coiled coil 570..596 CDD:270211 14/25 (56%)
3-helical coiled coil 724..755 CDD:270211 28/30 (93%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159387
Domainoid 1 1.000 381 1.000 Domainoid score I844
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1281
Inparanoid 1 1.050 519 1.000 Inparanoid score I1283
Isobase 1 0.950 - 0 Normalized mean entropy S922
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1016088at2759
OrthoFinder 1 1.000 - - FOG0001981
OrthoInspector 1 1.000 - - otm42041
orthoMCL 1 0.900 - - OOG6_101992
Panther 1 1.100 - - O PTHR10137
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1630
SonicParanoid 1 1.000 - - X1294
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1413.880

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