DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATP6V0C and VMA3

DIOPT Version :10

Sequence 1:NP_001685.1 Gene:ATP6V0C / 527 HGNCID:855 Length:155 Species:Homo sapiens
Sequence 2:NP_010887.3 Gene:VMA3 / 856686 SGDID:S000000753 Length:160 Species:Saccharomyces cerevisiae


Alignment Length:148 Identity:106/148 - (71%)
Similarity:129/148 - (87%) Gaps:0/148 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     8 PEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAGIIAIYGLVV 72
            |.||.||..:|.::|::|::|||||||||||.||.|..|:||:.:.|:|:||:||||||||||||
Yeast     6 PVYAPFFGAIGCASAIIFTSLGAAYGTAKSGVGICATCVLRPDLLFKNIVPVIMAGIIAIYGLVV 70

Human    73 AVLIANSLNDDISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIF 137
            :||:..||....:||..|:|||||||||||||||||||||||||||||::|||||||||||||||
Yeast    71 SVLVCYSLGQKQALYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGSSQQPRLFVGMILILIF 135

Human   138 AEVLGLYGLIVALILSTK 155
            |||||||||||||:|:::
Yeast   136 AEVLGLYGLIVALLLNSR 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATP6V0CNP_001685.1 V_ATP_synt_C 13..118 CDD:130170 70/104 (67%)
ATP-synt_Vo_c_ATP6C_rpt2 86..153 CDD:349416 60/66 (91%)
VMA3NP_010887.3 V_ATP_synt_C 11..116 CDD:130170 70/104 (67%)
ATP-synt_Vo_c_ATP6C_rpt2 84..151 CDD:349416 60/66 (91%)

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