DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATP6V0C and vma3

DIOPT Version :10

Sequence 1:NP_001685.1 Gene:ATP6V0C / 527 HGNCID:855 Length:155 Species:Homo sapiens
Sequence 2:NP_594799.1 Gene:vma3 / 2542471 PomBaseID:SPAC1B3.14 Length:161 Species:Schizosaccharomyces pombe


Alignment Length:148 Identity:113/148 - (76%)
Similarity:132/148 - (89%) Gaps:0/148 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     8 PEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAGIIAIYGLVV 72
            |.||.||.|||.:||:||::.||||||||:|.||:||.|:||:.|:|:.||||||||||||||||
pombe     7 PVYAPFFGVMGCTAAIVFASFGAAYGTAKAGVGISAMGVLRPDLIVKNTIPVVMAGIIAIYGLVV 71

Human    73 AVLIANSLNDDISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIF 137
            :|||:.:|...:|||..|:||||||||||:|||||||||||||||||||||||||||.|||||||
pombe    72 SVLISGNLKQILSLYSGFIQLGAGLSVGLAGLAAGFAIGIVGDAGVRGTAQQPRLFVAMILILIF 136

Human   138 AEVLGLYGLIVALILSTK 155
            |||||||||||||:|:|:
pombe   137 AEVLGLYGLIVALLLNTR 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATP6V0CNP_001685.1 V_ATP_synt_C 13..118 CDD:130170 75/104 (72%)
ATP-synt_Vo_c_ATP6C_rpt2 86..153 CDD:349416 60/66 (91%)
vma3NP_594799.1 V_ATP_synt_C 12..117 CDD:130170 75/104 (72%)
ATP-synt_Vo_c_ATP6C_rpt2 85..152 CDD:349416 60/66 (91%)

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