DRSC/TRiP Functional Genomics Resources

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Protein Alignment SERPINA1 and serpina1

DIOPT Version :10

Sequence 1:NP_000286.3 Gene:SERPINA1 / 5265 HGNCID:8941 Length:418 Species:Homo sapiens
Sequence 2:NP_001071226.1 Gene:serpina1 / 322701 ZFINID:ZDB-GENE-030131-1421 Length:429 Species:Danio rerio


Alignment Length:434 Identity:176/434 - (40%)
Similarity:263/434 - (60%) Gaps:31/434 - (7%)


- Green bases have known domain annotations that are detailed below.


Human     7 WGILLLAGLCC-----LVPVSLAEDPQG----DAAQKTDTSHH------DQDHPTF------NKI 50
            ||.:    .||     ||..:.|....|    |....|...||      |:.||:.      :.:
Zfish     2 WGNI----YCCAIAALLVATAWAAPHDGHVGHDHGSHTADHHHHLHHGKDEPHPSHKGVDACHLL 62

Human    51 TPNLAEFAFSLYRQLAH--QSNSTNIFFSPVSIATAFAMLSLGTKADTHDEILEGLNFN-LTEIP 112
            .|:.|:||||||::||.  .....|||||||.|:.|.::|::|.||.|..:|..||.:: ||  |
Zfish    63 APHNADFAFSLYKKLASNPDGQGKNIFFSPVGISMALSLLAVGAKASTLSQIYSGLGYSALT--P 125

Human   113 EAQIHEGFQELLRTLNQPDSQLQLTTGNGLFLSEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEA 177
            | |::||::.||..|......:||..|.|:.:.:|.|:||:||:|.:..|:||||.|:|...|.|
Zfish   126 E-QVNEGYEHLLHMLGHSQDAMQLEAGAGVAIRDGFKVVDQFLKDAQHYYNSEAFGVDFSKPEIA 189

Human   178 KKQINDYVEKGTQGKIVDLVKELDRDTVFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKV 242
            ..:||.::.:.|..||.::||:||.|||..|:||::|:||||:||:.|.|.:.||.|||.|||:|
Zfish   190 AAEINKFIARKTHDKITNMVKDLDADTVMMLINYMYFRGKWEKPFDAKLTHKADFKVDQDTTVQV 254

Human   243 PMMKRLGMFNIQHCKKLSSWVLLMKYLGNATAIFFLPDEGKLQHLENELTHDIITKFLENEDRRS 307
            .||||.|.::|.......:.|:::.|.||.:.:..|||:||::.||..:....:..:.:...|.|
Zfish   255 DMMKRTGRYDIYQDPVNQTTVMMVPYKGNTSMMIVLPDDGKMKELEESICRHHLKNWHDKLFRSS 319

Human   308 ASLHLPKLSITGTYDLKSVLGQLGITKVFSNGADLSGVTEEAPLKLSKAVHKAVLTIDEKGTEAA 372
            ..|.:||.||:.|..|..:|..:|:|..|::.||.||:|||..:|:|:.:|:||:::||||||||
Zfish   320 VDLFMPKFSISATSKLDGILKDMGMTDAFNDKADFSGMTEEVKVKVSQVLHQAVMSVDEKGTEAA 384

Human   373 GAMFLEAIPMSIPPEVKFNKPFVFLMIEQNTKSPLFMGKVVNPT 416
            ....:|.:|||:|..|..|:||:.|::|.:|.|.|||||:.|||
Zfish   385 AITTIEIMPMSLPDTVILNRPFLVLIVEDSTMSILFMGKITNPT 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SERPINA1NP_000286.3 serpinA1_A1AT 50..417 CDD:381012 161/370 (44%)
RCL 368..392 11/23 (48%)
serpina1NP_001071226.1 serpinA_A1AT-like 65..429 CDD:381017 160/367 (44%)

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