DRSC/TRiP Functional Genomics Resources

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Protein Alignment SERPINA1 and Serpina1c

DIOPT Version :10

Sequence 1:NP_000286.3 Gene:SERPINA1 / 5265 HGNCID:8941 Length:418 Species:Homo sapiens
Sequence 2:NP_033271.1 Gene:Serpina1c / 20702 MGIID:891969 Length:413 Species:Mus musculus


Alignment Length:419 Identity:270/419 - (64%)
Similarity:340/419 - (81%) Gaps:7/419 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MPSSVSWGILLLAGLCCLVPVSLAEDPQGDAAQKTDTSHHDQDHPTFNKITPNLAEFAFSLYRQL 65
            |..|:|||:|||||||||||..||||     .|:||||..||. |..::|..||.:||.||||:|
Mouse     1 MTPSISWGLLLLAGLCCLVPSFLAED-----VQETDTSQKDQS-PASHEIATNLGDFAISLYREL 59

Human    66 AHQSNSTNIFFSPVSIATAFAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQP 130
            .||||::|||||||||||||||||||:|.|||.:|||||.||||:..||.||:.||.||:|||:|
Mouse    60 VHQSNTSNIFFSPVSIATAFAMLSLGSKGDTHTQILEGLQFNLTQTSEADIHKSFQHLLQTLNRP 124

Human   131 DSQLQLTTGNGLFLSEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVD 195
            ||:|||:||||||::..||||:||||:.|..|.:|.|:|||.::|||||.|||:|||||||||.:
Mouse   125 DSELQLSTGNGLFVNNDLKLVEKFLEEAKNHYQAEVFSVNFAESEEAKKVINDFVEKGTQGKIAE 189

Human   196 LVKELDRDTVFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLGMFNIQHCKKLS 260
            .||:||:||||||.|||.|||||::||:.::|||.:||||:.||||||||...||.::.||..||
Mouse   190 AVKKLDQDTVFALANYILFKGKWKKPFDPENTEEAEFHVDESTTVKVPMMTLSGMLDVHHCSTLS 254

Human   261 SWVLLMKYLGNATAIFFLPDEGKLQHLENELTHDIITKFLENEDRRSASLHLPKLSITGTYDLKS 325
            ||||||.|.|||||:|.|||:||:||||..|:.::|:|||....||.|.:|.|:|||:|.|:||:
Mouse   255 SWVLLMDYAGNATAVFLLPDDGKMQHLEQTLSKELISKFLLKRPRRLAQIHFPRLSISGEYNLKT 319

Human   326 VLGQLGITKVFSNGADLSGVTEE-APLKLSKAVHKAVLTIDEKGTEAAGAMFLEAIPMSIPPEVK 389
            ::..||||::|:|||||||:||| ||||||:||||||||:||.|||||.|..|.|:|.|:||.|:
Mouse   320 LMSPLGITRIFNNGADLSGITEENAPLKLSQAVHKAVLTMDETGTEAAAATVLLAVPYSMPPIVR 384

Human   390 FNKPFVFLMIEQNTKSPLFMGKVVNPTQK 418
            |:.||:|::.|::|:||||:||||:||.|
Mouse   385 FDHPFLFIIFEEHTQSPLFVGKVVDPTHK 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SERPINA1NP_000286.3 serpinA1_A1AT 50..417 CDD:381012 240/367 (65%)
RCL 368..392 14/23 (61%)
Serpina1cNP_033271.1 serpinA1_A1AT 44..412 CDD:381012 240/367 (65%)

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