DRSC/TRiP Functional Genomics Resources

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Protein Alignment SERPINA1 and Serpina1b

DIOPT Version :10

Sequence 1:NP_000286.3 Gene:SERPINA1 / 5265 HGNCID:8941 Length:418 Species:Homo sapiens
Sequence 2:NP_033270.3 Gene:Serpina1b / 20701 MGIID:891970 Length:413 Species:Mus musculus


Alignment Length:419 Identity:269/419 - (64%)
Similarity:341/419 - (81%) Gaps:7/419 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MPSSVSWGILLLAGLCCLVPVSLAEDPQGDAAQKTDTSHHDQDHPTFNKITPNLAEFAFSLYRQL 65
            |..|:|||:||||||||:||..||||     .|:||||..||. |..::|..||.:||.||||:|
Mouse     1 MTPSISWGLLLLAGLCCMVPSFLAED-----VQETDTSQKDQS-PASHEIATNLGDFAISLYREL 59

Human    66 AHQSNSTNIFFSPVSIATAFAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQP 130
            .||||::|||||||||||||||||||:|.|||.:|||||.||||:..||.||:.||.||:|||:|
Mouse    60 VHQSNTSNIFFSPVSIATAFAMLSLGSKGDTHTQILEGLQFNLTQTSEADIHKSFQHLLQTLNRP 124

Human   131 DSQLQLTTGNGLFLSEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVD 195
            ||:|||:||||||::..||||:||||:.|..|.:|.|:|||.::|||||.|||:||||||||||:
Mouse   125 DSELQLSTGNGLFVNNDLKLVEKFLEEAKNHYQAEVFSVNFAESEEAKKVINDFVEKGTQGKIVE 189

Human   196 LVKELDRDTVFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLGMFNIQHCKKLS 260
            .|||||:||||||.|||.|||||::||:.::|||.:||||:.||||||||...||.::.||..||
Mouse   190 AVKELDQDTVFALANYILFKGKWKKPFDPENTEEAEFHVDKSTTVKVPMMMLSGMLDVHHCSILS 254

Human   261 SWVLLMKYLGNATAIFFLPDEGKLQHLENELTHDIITKFLENEDRRSASLHLPKLSITGTYDLKS 325
            ||||||.|.|||:|:|.||::||:||||..|..::|:|.|.|..||...:|:|:|||:|.|:||:
Mouse   255 SWVLLMDYAGNASAVFLLPEDGKMQHLEQTLNKELISKILLNRRRRLVQIHIPRLSISGDYNLKT 319

Human   326 VLGQLGITKVFSNGADLSGVTEE-APLKLSKAVHKAVLTIDEKGTEAAGAMFLEAIPMSIPPEVK 389
            ::..||||::|:|||||||:||| ||||||||||||||||||.|||||.|...||:|||:||.::
Mouse   320 LMSPLGITRIFNNGADLSGITEENAPLKLSKAVHKAVLTIDETGTEAAAATVFEAVPMSMPPILR 384

Human   390 FNKPFVFLMIEQNTKSPLFMGKVVNPTQK 418
            |:.||:|::.|::|:||:|:||||:||.|
Mouse   385 FDHPFLFIIFEEHTQSPIFVGKVVDPTHK 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SERPINA1NP_000286.3 serpinA1_A1AT 50..417 CDD:381012 240/367 (65%)
RCL 368..392 14/23 (61%)
Serpina1bNP_033270.3 serpinA1_A1AT 44..412 CDD:381012 240/367 (65%)
RCL 368..387 9/18 (50%)

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