DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ABCB1 and CG11147

DIOPT Version :10

Sequence 1:NP_001335874.1 Gene:ABCB1 / 5243 HGNCID:40 Length:1350 Species:Homo sapiens
Sequence 2:NP_608954.1 Gene:CG11147 / 33803 FlyBaseID:FBgn0031734 Length:711 Species:Drosophila melanogaster


Alignment Length:804 Identity:161/804 - (20%)
Similarity:274/804 - (34%) Gaps:263/804 - (32%)


- Green bases have known domain annotations that are detailed below.


Human   462 LEFRNVHFSYPSRKEVKI-LKGLNLKVQSGQTVALVGNSGCGKSTTVQLM--QRLYDPTEGMV-- 521
            :|.||.:..|.|:...|| |..||:.|..|....|:|.|||||:|.:..:  ||..:..|.:|  
  Fly     4 VEVRNGYKYYGSKSNPKIVLNQLNMNVMRGSIYGLLGASGCGKTTLLSCIVGQRRLNGGEVVVLG 68

Human   522 ---SVDGQDIRTINVRFLREIIGVVSQEPVLFATTIAENI-----RYGRENVTMDEIEKAVKEAN 578
               ...|..:....|.|:.:.|.:|.:      .|:.|.|     .||..:..:.|..|.:||  
  Fly    69 AKPGEPGSGVPGSRVGFMPQEIALVEE------MTVKETIFYFGRIYGLTDERIREKFKLLKE-- 125

Human   579 AYDFIMKLPHKFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTE-SEAVVQVA 642
                :::||.....:     .|.||||::|::.|.|::.:|::|:|||.|..||.. .|.:....
  Fly   126 ----LLQLPPARQMI-----KQCSGGQQRRLSFACAMIHDPELLILDEPTVGLDPMLREKIWDFL 181

Human   643 LDKARKGRTTIVI-AHRLSTVRNADVIAGFDDGVIVEKGNHDELMKEKGIY-----FKLVTMQTA 701
            ::..|..:..::| .|.:...:.|:.|....:||::.:.....:|.:.|..     | |:..|..
  Fly   182 VETTRNSKLAVIITTHYIEEAKQANCIGLMRNGVLLAEDTPTNIMIKFGTQSIEDAF-LILSQRQ 245

Human   702 GNEVELENAADESKSEIDALEMSSNDSRSSLIRKRSTRRSVRGSQAQDRKLSTKEALDESIPPVS 766
            |||.||....|.:|                             :||....:...|.:|...|   
  Fly   246 GNEDELAQIMDHNK-----------------------------NQALPAAVLPPEVIDTHEP--- 278

Human   767 FWRIMKLNLTEWPYFVVGVFCAIINGGLQPAFAIIFSKIIGVFTRIDDPETKRQNSNLFSLLFLA 831
                   |:.|                .||.                 |..:..|.|...:.|. 
  Fly   279 -------NMPE----------------KQPI-----------------PFEEPLNENRKKIFFT- 302

Human   832 LGIISFITFFLQGFTFGKAGEILTKRLRYMVFRSMLRQDVSWFDDPKNTTGALTTRLANDAAQVK 896
                          |.|:...::||.     |..:.||.                          
  Fly   303 --------------TKGRVKALMTKN-----FVQLFRQP-------------------------- 322

Human   897 GAIGSRLAVITQNIANLGTGIIISFIYG-WQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKEL 960
                              :|||...::. .|||...|||                          
  Fly   323 ------------------SGIIFMLLFPIIQLTCFYLAI-------------------------- 343

Human   961 EGSGKIATEAIENFRTVVSLTQEQKFEHMYAQSLQVPYRNSLRKAHIFG-ITFSFTQAM------ 1018
               ||..|    |....|...:.:.:...:.::|...|::|..::.:|. ::..:.:.:      
  Fly   344 ---GKTPT----NLEIGVYSGEVENYGECFDENLVTVYKDSDNESCLFNKLSCRYIRVLGDDVAT 401

Human  1019 --MYFSYAGCFRFG------AYLVAHKLMSFEDVLLVFSAVVFGAMAVG-QVSSFAPDYAKAKIS 1074
              .|.|.|......      .||  |...:|.|.:|       ..|..| ..|..|.|:|:..| 
  Fly   402 RKYYASEADALNDAKRATTVGYL--HFAQNFSDSIL-------SVMEDGIHSSDGAVDHAELSI- 456

Human  1075 AAHIIMIIEKT------PLIDSYSTEGLMPNTLEG-NVTFGEVVFNYPTRPDIPVLQGLSLEVKK 1132
              ||.|..::.      .|.|.:||  .|.:.::. ||:  ..:.:.|.:...|:.....:|.::
  Fly   457 --HIDMTDQQVAYFMQRKLRDKFST--FMRSVVKDCNVS--TAIVDLPVQFQEPIFGSTDIEFQQ 515

Human  1133 ----GQTLALVGSSGCGKSTVVQLLERFYDPLAGKVLLDGKEIKRLNVQWLRAHL-------GIV 1186
                |..:.:|.......:..|.:.||. |.:..:.||.|  :....:.|  |||       .:.
  Fly   516 YCAPGVVMTMVFFLATLMTAAVFISERM-DGIWDRTLLAG--VSATEMLW--AHLLTQLIIMALQ 575

Human  1187 SQEPILFDCSIAENIAYGDNSRVV 1210
            |.|.|::...:.:....||.:.::
  Fly   576 SFEVIMYIGLVFDTYNNGDTTTLI 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ABCB1NP_001335874.1 PTZ00265 123..1337 CDD:240339 161/804 (20%)
CG11147NP_608954.1 CcmA 4..245 CDD:440746 69/258 (27%)
ABC2_membrane_3 322..702 CDD:463674 65/376 (17%)
YadH 513..710 CDD:440604 18/92 (20%)

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