DRSC/TRiP Functional Genomics Resources

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Protein Alignment PEX13 and pex13

DIOPT Version :10

Sequence 1:NP_002609.1 Gene:PEX13 / 5194 HGNCID:8855 Length:403 Species:Homo sapiens
Sequence 2:NP_956939.1 Gene:pex13 / 393618 ZFINID:ZDB-GENE-040426-1544 Length:416 Species:Danio rerio


Alignment Length:424 Identity:256/424 - (60%)
Similarity:303/424 - (71%) Gaps:38/424 - (8%)


- Green bases have known domain annotations that are detailed below.


Human     7 PPPKPWETRRIPGAGPGPGPGPTFQSADLGPTLMTRP---GQPALTRVPPPILPRPSQQTGSSSV 68
            ||||||| |||||....|   ..::|.|.|....:.|   |.|.||||.|||.|||.:|      
Zfish     4 PPPKPWE-RRIPGTITAP---LNYRSTDFGSVSQSGPSGSGPPVLTRVVPPIPPRPVRQ------ 58

Human    69 NTFRPAYSSFSSGYGAYGNSFYGGYSPYSY-GY---NGLGYNRLR-VDDLPPSRFVQQAEESSRG 128
             ::||.||||.|.|..||||.||||||||| ||   .||||||.. :|::|||||||||||||||
Zfish    59 -SYRPTYSSFPSSYSPYGNSMYGGYSPYSYSGYGVGGGLGYNRFNTMDEIPPSRFVQQAEESSRG 122

Human   129 AFQSIESIVHAFASVSMMMDATFSAVYNSFRAVLDVANHFSRLKIHFTKVFSAFALVRTIRYLYR 193
            ||||||||||||:||||||||||||||||||||||||||||||:||||||.||||||||:|||||
Zfish   123 AFQSIESIVHAFSSVSMMMDATFSAVYNSFRAVLDVANHFSRLRIHFTKVLSAFALVRTLRYLYR 187

Human   194 RLQRMLGLRRGSENEDLWAESEGTVACL--------GAEDRAATSAKSWPIFLFFAVILGGPYLI 250
            ||||::|||:|||.:||||:|..:.:.:        |.|:....|.|||||||||||:|||||||
Zfish   188 RLQRLMGLRQGSEVDDLWADSAASSSVVSASGARGAGVEEPGVNSVKSWPIFLFFAVVLGGPYLI 252

Human   251 WKLLSTHSDEVTDSINWASGEDDHVVARAEYDFAAVSEEEISFRAGDMLNLALKEQQPKVRGWLL 315
            |:|||:......::.|||||||||||||.||||.|.||||||.:||||||||.|||||:||||||
Zfish   253 WRLLSSAEGAEENATNWASGEDDHVVARVEYDFTAASEEEISVQAGDMLNLAPKEQQPRVRGWLL 317

Human   316 ASLDGQTTGLIPANYVKILGKRKGRKTVESSKVSKQQQSFTNPTLTKGATVADSL---DEQEAAF 377
            ||:|||||||:||||||:||:|:|||..|..::::.|:...|....:.|.:..|:   ...|...
Zfish   318 ASVDGQTTGLVPANYVKVLGRRRGRKHAELERMAQAQEPAQNLPAPQTALITASVPTTTHSEDLL 382

Human   378 ESVFVETNKVPV--------APDSIGKDGEKQDL 403
            |||:.||..:.:        :.|::....||.||
Zfish   383 ESVYGETQGLGLEVQASTHNSRDTLVMHSEKMDL 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PEX13NP_002609.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..68 30/63 (48%)
Peroxin-13_N 117..254 CDD:461167 110/144 (76%)
Targeting to peroxisomes. /evidence=ECO:0000269|PubMed:11390669 145..233 64/95 (67%)
Interaction with PEX19. /evidence=ECO:0000269|PubMed:11390669 175..196 18/20 (90%)
SH3_PEX13_eumet 276..333 CDD:212798 47/56 (84%)
pex13NP_956939.1 Peroxin-13_N 111..256 CDD:461167 110/144 (76%)
SH3_PEX13_eumet 278..335 CDD:212798 47/56 (84%)

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