DRSC/TRiP Functional Genomics Resources

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Protein Alignment PEX13 and Pex13

DIOPT Version :10

Sequence 1:NP_002609.1 Gene:PEX13 / 5194 HGNCID:8855 Length:403 Species:Homo sapiens
Sequence 2:NP_001100712.1 Gene:Pex13 / 305581 RGDID:1310682 Length:403 Species:Rattus norvegicus


Alignment Length:403 Identity:370/403 - (91%)
Similarity:385/403 - (95%) Gaps:0/403 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MASQPPPPPKPWETRRIPGAGPGPGPGPTFQSADLGPTLMTRPGQPALTRVPPPILPRPSQQTGS 65
            |||||||||||||||||||||||||||||||||||||||:||||||.|||||||||||||||||.
  Rat     1 MASQPPPPPKPWETRRIPGAGPGPGPGPTFQSADLGPTLLTRPGQPTLTRVPPPILPRPSQQTGG 65

Human    66 SSVNTFRPAYSSFSSGYGAYGNSFYGGYSPYSYGYNGLGYNRLRVDDLPPSRFVQQAEESSRGAF 130
            ::||||||||||||||||||||:|||.||||||||||||:|||||||||||||||||||||||||
  Rat    66 NNVNTFRPAYSSFSSGYGAYGNAFYGSYSPYSYGYNGLGFNRLRVDDLPPSRFVQQAEESSRGAF 130

Human   131 QSIESIVHAFASVSMMMDATFSAVYNSFRAVLDVANHFSRLKIHFTKVFSAFALVRTIRYLYRRL 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   131 QSIESIVHAFASVSMMMDATFSAVYNSFRAVLDVANHFSRLKIHFTKVFSAFALVRTIRYLYRRL 195

Human   196 QRMLGLRRGSENEDLWAESEGTVACLGAEDRAATSAKSWPIFLFFAVILGGPYLIWKLLSTHSDE 260
            |.|:||||||||||||||||||||||||||:|..|||||||||||||||||||||||||||||||
  Rat   196 QWMMGLRRGSENEDLWAESEGTVACLGAEDQANNSAKSWPIFLFFAVILGGPYLIWKLLSTHSDE 260

Human   261 VTDSINWASGEDDHVVARAEYDFAAVSEEEISFRAGDMLNLALKEQQPKVRGWLLASLDGQTTGL 325
            ||||.|||:||||||||||||||||||:|||||||||||||||||||||||||||||||||||||
  Rat   261 VTDSTNWANGEDDHVVARAEYDFAAVSDEEISFRAGDMLNLALKEQQPKVRGWLLASLDGQTTGL 325

Human   326 IPANYVKILGKRKGRKTVESSKVSKQQQSFTNPTLTKGATVADSLDEQEAAFESVFVETNKVPVA 390
            ||||||||||||:||||||||.:.||||||||||..||.|..:||:||||||||||||||||...
  Rat   326 IPANYVKILGKRRGRKTVESSTMPKQQQSFTNPTSVKGVTTTNSLEEQEAAFESVFVETNKVAGT 390

Human   391 PDSIGKDGEKQDL 403
            |||.||:|:||||
  Rat   391 PDSTGKNGDKQDL 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PEX13NP_002609.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..68 62/66 (94%)
Peroxin-13_N 117..254 CDD:461167 131/136 (96%)
Targeting to peroxisomes. /evidence=ECO:0000269|PubMed:11390669 145..233 82/87 (94%)
Interaction with PEX19. /evidence=ECO:0000269|PubMed:11390669 175..196 20/20 (100%)
SH3_PEX13_eumet 276..333 CDD:212798 55/56 (98%)
Pex13NP_001100712.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..69 62/67 (93%)
Peroxin-13_N 117..254 CDD:461167 131/136 (96%)
Targeting to peroxisomes. /evidence=ECO:0000250|UniProtKB:Q92968 145..233 82/87 (94%)
Interaction with PEX19. /evidence=ECO:0000250|UniProtKB:Q92968 175..196 20/20 (100%)
SH3_PEX13_eumet 276..333 CDD:212798 55/56 (98%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 341..364 17/22 (77%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 381..403 15/21 (71%)

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