DRSC/TRiP Functional Genomics Resources

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Protein Alignment PEX13 and pex13

DIOPT Version :10

Sequence 1:NP_002609.1 Gene:PEX13 / 5194 HGNCID:8855 Length:403 Species:Homo sapiens
Sequence 2:NP_593611.1 Gene:pex13 / 2543046 PomBaseID:SPAC3C7.10 Length:288 Species:Schizosaccharomyces pombe


Alignment Length:270 Identity:60/270 - (22%)
Similarity:111/270 - (41%) Gaps:48/270 - (17%)


- Green bases have known domain annotations that are detailed below.


Human    87 NSFYGGYSPYSYGYNGLGYNRLRVDDLPPSRFVQQAEESSRG-----AFQSIESIVHAFASVSMM 146
            |.:..|::||| |:|..         :|........|.:..|     :.|.|||||.|..|::.:
pombe    47 NYYNMGFNPYS-GFNSF---------IPSFNPFVPLETNLPGNGPISSLQVIESIVGAVGSIAQV 101

Human   147 MDATFSAVYNSFRAVLDVANHFSRLKIHFTKVFSAFALVRTIRYL------YRRLQRMLGLRRGS 205
            :::|..|.:.|:...:.|:.:.::||.....:|...:|:..::.|      :.::..|     .|
pombe   102 LESTLMAAHMSYNTFVSVSENLNKLKSSIGAIFGIVSLLSRLKRLVLKFFKHSKIDEM-----NS 161

Human   206 ENEDLWAESEGTVACLGAEDRAATSAKSWPIFLFFAVILG--G-PYLIWKLLST--HSDEVTDSI 265
            :..|::.:.||.           .....:.|....|:|||  | ||.|.:|...  ..::.....
pombe   162 QEYDVFEKEEGN-----------HKNSIYSIVSSLAIILGLVGLPYAIIRLFKNIYEKEKQIQQA 215

Human   266 NWASGEDDHVVARAEYDFAAVSEE---EISFRAGDMLNLALK-EQQPKVRGWLLASLDGQTTGLI 326
            ......|.....:|:|:|  :|.:   |:|.:.||::.:..| :.|.....|.........||..
pombe   216 KIRKKIDSLEFCKADYEF--MSRDPGVEMSLKKGDIIAILSKTDTQGNPCEWWQGRKRSGETGWF 278

Human   327 PANYVKILGK 336
            |:||..|:.:
pombe   279 PSNYCSIISR 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PEX13NP_002609.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..68
Peroxin-13_N 117..254 CDD:461167 33/150 (22%)
Targeting to peroxisomes. /evidence=ECO:0000269|PubMed:11390669 145..233 14/93 (15%)
Interaction with PEX19. /evidence=ECO:0000269|PubMed:11390669 175..196 3/26 (12%)
SH3_PEX13_eumet 276..333 CDD:212798 16/60 (27%)
pex13NP_593611.1 Peroxin-13_N 86..201 CDD:461167 31/130 (24%)
SH3_Pex13p_fungal 226..285 CDD:212705 16/60 (27%)
Blue background indicates that the domain is not in the aligned region.

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