DRSC/TRiP Functional Genomics Resources

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Protein Alignment PEX13 and prx-13

DIOPT Version :10

Sequence 1:NP_002609.1 Gene:PEX13 / 5194 HGNCID:8855 Length:403 Species:Homo sapiens
Sequence 2:NP_495513.1 Gene:prx-13 / 174192 WormBaseID:WBGene00004198 Length:330 Species:Caenorhabditis elegans


Alignment Length:351 Identity:135/351 - (38%)
Similarity:188/351 - (53%) Gaps:42/351 - (11%)


- Green bases have known domain annotations that are detailed below.


Human    49 TRVPPPILPRP-SQQTGSSSVNT-FRPAYSSFSSGYGAY---GNSFYGGYSPY----SYGYNGLG 104
            |..|||:.||. ..|..:..:|| |     .:..|||..   |:..|||...|    .||..|.|
 Worm     6 TNQPPPLPPRSFDNQMSNPMINTGF-----GYGGGYGMNTFPGSGMYGGGGMYGGGMGYGGFGGG 65

Human   105 YNRLRVDDLPPSRFVQQAEESSRGAFQSIESIVHAFASVSMMMDATFSAVYNSFRAVLDVANHFS 169
            :|.:.....|.|.|.:.|||.||||||||||:|:|.:||:.|:::|.:|||:|||||:.|...|.
 Worm    66 FNHMGYGQGPDSNFARLAEEQSRGAFQSIESVVNAVSSVANMLNSTHNAVYSSFRAVIGVVEQFG 130

Human   170 RLKIHFTKVFSAFALVRTIRYLYRRLQRMLGLR---RGSENEDLWAESEG-TVACLGAEDRAATS 230
            |||...:.|..:.|:.|.:...:|.|..||.|:   ..|..|..|..|:. ....|||....|  
 Worm   131 RLKTQLSSVVVSLAVFRWVYRFWRWLLVMLKLKPASYASAAEMAWGTSQPYATDVLGATRTPA-- 193

Human   231 AKSWPIFLFFAVILGGPYLIWKLLSTHSDEVTDSINWASGEDDHVVARAEYDFAAVSEEEISFRA 295
            :.:||..||:.|.:|||:||::.:|.......:...||:|...|..|:|.:||.|.:|:|:||..
 Worm   194 SVNWPAALFWVVAIGGPWLIYRCVSQMVQAAEEKRKWATGAAPHYTAQALFDFQASNEQELSFMN 258

Human   296 GDMLNLALKEQQPKVRGWLLASL-DGQTTGLIPANYVKILGKRKGRKTVESSKVSKQQQSFTNPT 359
            |:.|.:|.||:||:||||||||: ||...||:|.|||:|:|              ||.||   |.
 Worm   259 GETLRVAPKEEQPRVRGWLLASVADGSRIGLVPINYVRIVG--------------KQSQS---PP 306

Human   360 LTKGATVADSLDEQEAAFESVFVETN 385
            ||:    ..:||....||.:..:.:|
 Worm   307 LTQ----QSNLDTFVNAFPARDLNSN 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PEX13NP_002609.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..68 7/19 (37%)
Peroxin-13_N 117..254 CDD:461167 59/140 (42%)
Targeting to peroxisomes. /evidence=ECO:0000269|PubMed:11390669 145..233 31/91 (34%)
Interaction with PEX19. /evidence=ECO:0000269|PubMed:11390669 175..196 4/20 (20%)
SH3_PEX13_eumet 276..333 CDD:212798 32/57 (56%)
prx-13NP_495513.1 Peroxin-13_N 78..217 CDD:461167 59/140 (42%)
SH3_PEX13_eumet 239..297 CDD:212798 32/57 (56%)

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