DRSC/TRiP Functional Genomics Resources

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Protein Alignment PEX12 and prx-12

DIOPT Version :10

Sequence 1:NP_000277.1 Gene:PEX12 / 5193 HGNCID:8854 Length:359 Species:Homo sapiens
Sequence 2:NP_001309444.1 Gene:prx-12 / 181331 WormBaseID:WBGene00004197 Length:344 Species:Caenorhabditis elegans


Alignment Length:363 Identity:130/363 - (35%)
Similarity:198/363 - (54%) Gaps:47/363 - (12%)


- Green bases have known domain annotations that are detailed below.


Human    10 AASVA----DDQPSIFEVVAQDSLMTAVRPALQHVVKVLAESNPTHYGFLWRWFDEIFTLLDLLL 70
            |:|::    :.|||:|:::||::|.|::||||||:||.||...|..:..:.|.|||.:.:.||:|
 Worm    11 ASSISPKTEEKQPSVFDIIAQENLATSIRPALQHLVKYLAFFKPKTFLSVHRNFDEYYIIFDLIL 75

Human    71 QQHYLSRTSASFSENFYGLKRIVMGDTHKSQRLASAGLPKQQLWKSIMFLVLL---PYLKVKLEK 132
            |.|||....|||:||||.:|||..|          .|.|.....:.||.|:.|   ||::.||.:
 Worm    76 QNHYLRNYGASFTENFYSMKRIASG----------TGNPPNDGRERIMSLITLVGWPYVENKLNQ 130

Human   133 LVSSLREEDE----YSIHPPSSRWKRFYRAFLAAYPFVNMAWEGWFLVQQLRYILGKAQHHSPLL 193
            |...|:|..|    .||:...::.::.   |:..:|::..|.:......||.|||.::..|||.|
 Worm   131 LYDRLKEVYECRSWSSINGMKAKCQKM---FVIIWPYIKTALKAVKSALQLAYILNRSSIHSPWL 192

Human   194 RLAGVQLGRLTVQDIQALEHKPAKASMMQQPARSVSEKINSALKKAVGGVALSLSTGLSVGVFFL 258
            ..:||.|..||.:|::|....|.          .:.....:.:.:.:.|:...:|...:.|:||:
 Worm   193 YFSGVILKHLTPEDLEAFNAVPL----------HLQTGFFNRIWRFILGLPGIVSRLFAYGLFFV 247

Human   259 QFLDWWYSSENQETIKSLT------ALPTPPPPVHLDYNSDSPLLPKMKTVCPLCRKTRVNDTVL 317
            ||||:.|:::    :..||      |:|:||   |....|:|.:|......||:|.|.|||||.|
 Worm   248 QFLDYMYNTD----LAKLTKTGLDGAIPSPP---HKMIISESEILSLDTNKCPICLKKRVNDTAL 305

Human   318 ATSGYVFCYRCVFHYVRSHQACPITGYPTEVQHLIKLY 355
            ..|||||||.|:..||.::..||:||.|..|||||:|:
 Worm   306 FVSGYVFCYTCINQYVNTYNKCPVTGCPANVQHLIRLF 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PEX12NP_000277.1 Pex2_Pex12 26..267 CDD:398431 82/247 (33%)
mRING_PEX12 302..355 CDD:438115 30/52 (58%)
prx-12NP_001309444.1 Pex2_Pex12 31..256 CDD:398431 82/247 (33%)
mRING_PEX12 290..343 CDD:438115 30/52 (58%)

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