DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PEX1 and pex1

DIOPT Version :10

Sequence 1:NP_000457.1 Gene:PEX1 / 5189 HGNCID:8850 Length:1283 Species:Homo sapiens
Sequence 2:NP_001164306.1 Gene:pex1 / 793906 ZFINID:ZDB-GENE-070530-1 Length:1237 Species:Danio rerio


Alignment Length:1291 Identity:619/1291 - (47%)
Similarity:838/1291 - (64%) Gaps:87/1291 - (6%)


- Green bases have known domain annotations that are detailed below.


Human    17 VTVAFTNARDCFLHLPRRLVAQLHLLQNQAIEVVWS-HQPAFLSWVEGRHFSDQGENVAEINRQV 80
            ||:.|.|:::|||||.......|.|.:||.:|:.|. ..|.||||:..|  |...|:..||:||:
Zfish    10 VTLVFNNSKNCFLHLSSNFATHLCLHENQILELSWGVSAPVFLSWIRSR--SSGPEDRVEISRQL 72

Human    81 GQKLGLSNGGQVFLKPCSHVVSCQQVEVEPLSADDWEILELHAVSLEQHLLDQIRIVFPKAIFPV 145
            |:||||.:|.|.:|:||..|.|.|||.|||||.|||||||||:::|||.:|||||:||...:|||
Zfish    73 GEKLGLRDGEQGYLRPCLQVQSVQQVSVEPLSPDDWEILELHSLALEQRILDQIRVVFSDGVFPV 137

Human   146 WVDQQTYIFIQIVALIPAASYGRLETDTKLLIQPKTRRAKENTFSKADAEYKKLHSYGRDQKGMM 210
            ||||.|.|:|:|.:|.|:..|||||..|:|::.||.....| ...|..:|..:.|          
Zfish   138 WVDQHTVIYIRIASLTPSVPYGRLEQFTELIVSPKLHPGSE-LLHKPQSEEPRQH---------- 191

Human   211 KELQTKQLQSNTVGITESNENESEIPVDSS-----SVASLWTMIGSIFSFQSEKKQETSWGLTEI 270
               |...:.|:::. ..|.:::::.|...:     .:|.|..::..:|:...|..:|        
Zfish   192 ---QNVNITSSSIS-NASQDSQNDHPESLNEGHWGGIADLKGLVRYLFTRGREPAKE-------- 244

Human   271 NAFKNMQSKVVPL---DNIFRVCKSQPPSIYNASATSVFHKHCAIHVFPWD-QEYFDVEP-SFTV 330
                .:....:|.   |.|.|.|.|.|.|:.:..:.     |..:|:.||: ||..:..| ...:
Zfish   245 ----KIAVPTIPAILKDCILRTCGSPPRSVSHHGSC-----HGDVHILPWNLQEQENWNPGQSAL 300

Human   331 TYGKLVKLLSPKQQQSKTKQNVLSPEKEKQMSEPLDQKKIR-SDHNEED-----EKACVLQVVWN 389
            |||:|.|:||||:.:.|.||             .:::|||| :.|.|:|     |.:.|::::.:
Zfish   301 TYGRLSKILSPKELREKVKQ-------------AMEKKKIRDASHKEKDTEEHMENSAVVRMLCH 352

Human   390 GLEELNNAIKYTKNVEVLHLGKVWIPDDLRKRLNIEMHAVVRITPVEVTPKIPRSLKLQPRENLP 454
            .:..|....|..| .|.::.||:|||..|::||.|::|:.|||.|::..|::..::.:||.:.|.
Zfish   353 NINRLQEDQKLNK-CEEIYSGKIWIPKMLQRRLKIDLHSAVRIQPLKSMPRLAETVMVQPLQPLA 416

Human   455 KDISEEDIKTVFYSWLQQSTTTMLPLVISEEEFIKLETKDGLKEFSLSIVHSWEKEKDKNIFLLS 519
            :...||||:..|.:|....:...|..:......|.|...:|.:||:|:::.. |::::..:|.||
Zfish   417 ESEKEEDIQMAFLNWFDAQSHQPLTCLTGRSNIILLPCAEGKEEFALTVLKP-EQQQEDELFFLS 480

Human   520 PNLLQKTTIQVLLDPMVKE----ENSEEIDFILPFLKLSSLGGVNSLGVSSLEHITHSLLGRPLS 580
            .:||:||.||:..:|...:    :|..| |..|.|..|||||||..:..|:.:||:|:|||..||
Zfish   481 NSLLRKTDIQIAREPHNSDHRGSDNDTE-DQCLGFPSLSSLGGVEDISRSAFQHISHALLGGSLS 544

Human   581 RQLMSLVAGLRNGALLLTGGKGSGKSTLAKAICKEAFDKLDAHVERVDCKALRGKRLENIQKTLE 645
            |:|:|...|||.||||:||.||||||:|::|:|::|.:.||||::.:|||.|:|||.:.|::.||
Zfish   545 RELISTGRGLRGGALLITGAKGSGKSSLSRALCRKASEDLDAHIQLLDCKTLKGKRTDTIRQRLE 609

Human   646 VAFSEAVWMQPSVVLLDDLDLIAGLPAVPEHEHSPDAVQSQRLAHALNDMIKEFISMGSLVALIA 710
            ..|.:|||.|||||||||||.:||....|||||.|:||..|.::.:|.|::.|.:...||:|||.
Zfish   610 DVFEQAVWRQPSVVLLDDLDHVAGAATSPEHEHGPEAVLRQHISQSLKDLVDEIVLRSSLIALIV 674

Human   711 TSQSQQSLHPLLVSAQGVHIFQCVQHIQPPNQEQRCEILCNVI--KNKLDCDINKFTDLDLQHVA 773
            |:|::.:|||.|...||.|.||....|..|:|.||.|||.::|  |:...|.    |.|||..||
Zfish   675 TAQTEHALHPTLTVVQGSHFFQSFCKIPTPDQAQRVEILKSLIVKKSFQVCQ----TTLDLDSVA 735

Human   774 KETGGFVARDFTVLVDRAIHSRLSRQSISTREKLVLTTLDFQKALRGFLPASLRSVNLHKPRDLG 838
            |||.||:|||..:|::||||:.....|..      |:..||::||:||.|.||....|..|...|
Zfish   736 KETEGFMARDLNLLLERAIHANTLHNSED------LSCKDFRQALQGFTPPSLWDAQLQAPSGAG 794

Human   839 WDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFI 903
            .::||||||.||:|||.|.||||||.||::||:||.:|:||||.||||||||||.:|:||.||||
Zfish   795 MERIGGLHEARQLLMDIILLPAKYPLLFSSLPLRQCSGVLLYGAPGTGKTLLAGAVAKESGMNFI 859

Human   904 SVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQL 968
            |:|||||||||||||||||||:|.|||.|||||||||||:|:|||||||||||||||||||||||
Zfish   860 SIKGPELLSKYIGASEQAVRDVFQRAQQAKPCILFFDEFDSLAPRRGHDNTGVTDRVVNQLLTQL 924

Human   969 DGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQ 1033
            ||||||.|||||||:||||||||||||||||||.:||||||:.:|||||..|:.|:|||.||||.
Zfish   925 DGVEGLTGVYVLAASSRPDLIDPALLRPGRLDKSLYCPPPDREARLEILRALTHSVPLAADVDLD 989

Human  1034 HVASVTDSFTGADLKALLYNAQLEALHGMLLSSGLQDGSSSSDSDLSLSSMVFLNHSSGSDDSAG 1098
            .:|..|:.|||||||||||||||||:|..|..:.|.|..|.||||:||||::|||||||||||||
Zfish   990 QIAGATELFTGADLKALLYNAQLEAIHSSLGPNLLHDLGSGSDSDVSLSSLIFLNHSSGSDDSAG 1054

Human  1099 DGECGLDQSLVSLEMSEILPDESKFNMYRLYFGSSYESELGNGTSSDLSSQCLSAPSSMTQDLPG 1163
            :|:.||:.|:|.||.||:.|::.:.|::|||||||:||||.|   ..|:|||||.|:|...||.|
Zfish  1055 EGDAGLEHSMVLLEPSELPPEDPRHNIWRLYFGSSFESELDN---QSLNSQCLSGPNSTAPDLTG 1116

Human  1164 VPGKDQLFSQPPVLRTASQEGCQELTQEQRDQLRADISIIKGRYRSQSGE-DESMNQPGPIKTRL 1227
            ...:|......||..:..|:|.|||:.||.::|||::|.:|..||..:.| ..|:.|..|.|...
Zfish  1117 ASVRDPSSCHAPVFMSCVQQGFQELSHEQSERLRAEVSTVKNSYRKTTDESSSSLVQTSPSKPGS 1181

Human  1228 AISQSHLMTALGHTRPSISEDDWKNFAELYESFQNPKRRKNQSGTMFRPGQKVTLA 1283
            .|.|:||.|||.:||.|:|.:|||.:.||||||..||.||:||..:|:.||:||||
Zfish  1182 LICQTHLTTALANTRASVSREDWKRYTELYESFGAPKERKSQSNVLFKAGQRVTLA 1237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PEX1NP_000457.1 PEX-2N 17..98 CDD:462730 36/81 (44%)
PEX-1N 104..179 CDD:462729 47/74 (64%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 346..367 3/20 (15%)
CDC48 <595..1065 CDD:273521 294/471 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1260..1283 12/22 (55%)
pex1NP_001164306.1 PEX-2N 10..89 CDD:462730 35/80 (44%)
PEX-1N 101..171 CDD:462729 43/69 (62%)
CDC48 <559..1020 CDD:273521 293/470 (62%)

Return to query results.
Submit another query.