DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PEX1 and pex1

DIOPT Version :10

Sequence 1:NP_000457.1 Gene:PEX1 / 5189 HGNCID:8850 Length:1283 Species:Homo sapiens
Sequence 2:XP_004915478.1 Gene:pex1 / 779516 XenbaseID:XB-GENE-985415 Length:1269 Species:Xenopus tropicalis


Alignment Length:1294 Identity:670/1294 - (51%)
Similarity:891/1294 - (68%) Gaps:42/1294 - (3%)


- Green bases have known domain annotations that are detailed below.


Human     7 LAGAGGGGAAVTVAFTNARDCFLHLPRRLVAQLHLLQNQAIEVVWSHQ-PAFLSWVEGRHFSDQG 70
            :.|.|..||||::..|:|:|.||.:...::|||.|.|..|:||.||.| |.:|.|:|.|..:...
 Frog     1 MLGPGPPGAAVSLKLTSAKDTFLRVTPEVLAQLRLEQKHAVEVSWSDQEPVYLCWMERRSGTCSR 65

Human    71 ENVAEINRQVGQKLGLSNGGQVFLKPCSHVVSCQQVEVEPLSADDWEILELHAVSLEQHLLDQIR 135
            .||||:|||.|:.||.|:|.|||||.|::|:||::|.||||:||||:|||||:.:||..||||||
 Frog    66 TNVAELNRQFGEILGFSDGQQVFLKQCTNVISCKEVTVEPLTADDWDILELHSSALESRLLDQIR 130

Human   136 IVFPKAIFPVWVDQQTYIFIQIVALIPAASYGRLETDTKLLIQPKTRRAKENTFSKA-------D 193
            ||:||||||||||..|.|::||.||.|.:||||||..|:|::.||.|..:  |.|.|       |
 Frog   131 IVYPKAIFPVWVDPHTCIYLQIGALTPQSSYGRLEPLTELIVAPKQRNLE--TISPAFIPPGPED 193

Human   194 AEYKKLHSYGRDQKGMMKELQTKQLQ-SNTVGITESNENESEIPVDSSSVASLWTMIGSIFSFQS 257
            .:....|     :|...|:.:|...| .:|.|  ||...||:.....||..|:|..:|.......
 Frog   194 LDVNFSH-----EKSDHKQSRTADSQRQSTEG--ESGPTESDHSDSLSSSKSIWDTVGDFLLRSL 251

Human   258 EKKQETSWGLTEINAFKNMQSKVVPLDNIFRVCKSQPPSIYNASATSVFHKHCAIHVFPWDQEYF 322
            .:|...|.|.:|....|....|.|.|:.:|||....|..:.::...:.:.....:|||.|..|..
 Frog   252 GRKPALSLGSSETELIKKSLVKKVELEAVFRVSSRIPHIVKSSQEYNDYANDNCVHVFLWYPEPP 316

Human   323 DVEPSFTVTYGKLVKLLSPKQQQSKTKQNVLSPEKEKQMSEPLDQKKIRSDHNEEDEKACVLQVV 387
            .:.|...||:|.:.:|||||:::..|::|....||:.....|...|:..||....   :..:::|
 Frog   317 GLVPDIVVTFGTIQELLSPKRRKESTRKNTEPSEKKPDGIAPGSPKQRNSDTKGH---SATVKIV 378

Human   388 WNGLEELNNAIKY-TKNVEVLHLGKVWIPDDLRKRLNIEMHAVVRITPVEVTPKIPRSLKLQPRE 451
            |:|.::|.:.|:| |:|... |:||||:|..|||:|||.:.:.|||...:...::|.||.|||.:
 Frog   379 WHGFDDLKDVIEYDTRNGNT-HVGKVWVPSQLRKKLNINISSAVRIHSHDSVLRLPTSLTLQPAQ 442

Human   452 NLPKDISEEDIKTVFYSWLQQSTTTMLPLVISEEEFIKLETKDGLKEFSLSIVHSWEKEKDKNIF 516
            .|.::|.|::||..|.:|||.::|..:|.:.....:|::..||.:.:|.:.:.....:....:.:
 Frog   443 TLDRNIHEDEIKAAFSTWLQSNSTLKMPWIAGNTGYIQIILKDEVSDFFIILDKLDLQSSQDDFY 507

Human   517 LLSPNLLQKTTIQVLLDPMVKEENSEEI--DFILPFLKLSSLGGVNSLGVSSLEHITHSLLGRPL 579
            :|.|::::||.|.|..:|...||:...:  |..|.:|||.:||||:.||.|..:|:.|.||||||
 Frog   508 MLCPSIMEKTKIHVNFEPAPSEESHRHLHADQNLLYLKLQNLGGVSKLGKSCYDHVVHCLLGRPL 572

Human   580 SRQLMSLVAGLRNGALLLTGGKGSGKSTLAKAICKEAFDKLDAHVERVDCKALRGKRLENIQKTL 644
            ||||::..:|||:|.:||.|.|||||||||||:||||.::|:||||.:|||.|:||.:|||.:||
 Frog   573 SRQLVASASGLRSGGVLLCGPKGSGKSTLAKALCKEASEQLEAHVEEIDCKLLKGKNVENIIQTL 637

Human   645 EVAFSEAVWMQPSVVLLDDLDLIAGLPAVPEHEHSPDAVQSQRLAHALNDMIKEFISMGSLVALI 709
            |.||.||.|.||||:||||||.|||:.:.||.|.||:|.||::||:.|.|::|..|||.:||:||
 Frog   638 EEAFEEAAWRQPSVILLDDLDQIAGVASSPELEQSPEATQSKQLAYVLKDLMKNIISMDTLVSLI 702

Human   710 ATSQSQQSLHPLLVSAQGVHIFQCVQHIQPPNQEQRCEILCNVIKNKLDCDINKFTDLDLQHVAK 774
            ||.||:.||:|:|:|.||.|:||||:.|.||.||.|.|:|..||:|:|..|...:.|||.|::|:
 Frog   703 ATCQSEHSLNPVLISEQGTHLFQCVKPIPPPTQENRSEMLRCVIENRLSGDTAFYRDLDFQYLAR 767

Human   775 ETGGFVARDFTVLVDRAIHSRLSRQSISTREKLVLTTLDFQKALRGFLPASLRSVNLHKPRDLGW 839
            ||.||||||||:||:|||.|.:|::.|...|.|||:|.|||:||:||.|.|||:..||||:...|
 Frog   768 ETEGFVARDFTMLVERAIESSVSKRQICRIEDLVLSTTDFQRALKGFTPLSLRNAQLHKPKKQDW 832

Human   840 DKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFIS 904
            :.:||||::||:|.|||:|||||||||||||||.|:|:||||.|||||||||||||.||||||||
 Frog   833 NMVGGLHDIRQVLKDTIELPAKYPELFANLPIRHRSGVLLYGAPGTGKTLLAGVIAHESRMNFIS 897

Human   905 VKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLD 969
            :|||||||||||||||||||:|.|||||||||||||||:||||||||||||||||||||:|||||
 Frog   898 IKGPELLSKYIGASEQAVRDVFTRAQAAKPCILFFDEFDSIAPRRGHDNTGVTDRVVNQMLTQLD 962

Human   970 GVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQH 1034
            |||||||||||||||||||||||||||||||:|:|||||||.||.|||..||.|:.|.::|||:|
 Frog   963 GVEGLQGVYVLAATSRPDLIDPALLRPGRLDECLYCPPPDQDSRFEILKGLSHSMLLDENVDLKH 1027

Human  1035 VASVTDSFTGADLKALLYNAQLEALHGMLLSSGLQDGSSSSDSDLSLSSMVFLNHSSGSDDSAGD 1099
            :||:||.|||||||||||||||||:|..|..:..||.:|.||||:||||::||||||.||||.||
 Frog  1028 IASLTDYFTGADLKALLYNAQLEAIHTNLSVTVPQDNNSGSDSDMSLSSIIFLNHSSASDDSGGD 1092

Human  1100 GECGLDQSLVSLEMSEILPDESKFNMYRLYFGSSYESELGNGTSSDLSSQCLSAPSSMTQDLPGV 1164
            .:..||.||.||:|.::..::...:|:|||||:||:|:|||| ||:.:||..|..:|:|.:..|.
 Frog  1093 QDSVLDHSLPSLDMIKLPIEDIHSSMWRLYFGNSYDSDLGNG-SSEQTSQSFSGSNSITHEFTGP 1156

Human  1165 PGKDQLFSQPPVLRTASQEGCQELTQEQRDQLRADISIIKGR-----YRSQSGEDESMNQPGPIK 1224
            ...:.:.|||.|..::|.|..|:.:|||..::..:||:.|..     |.|.| :.||       |
 Frog  1157 TIGELVPSQPLVFISSSPEDHQQHSQEQCQKVDDEISVPKANCMNVVYDSHS-QMES-------K 1213

Human  1225 TRLAISQSHLMTALGHTRPSISEDDWKNFAELYESFQNPKRRKNQSGTMFRPGQKVTLA 1283
            ..|.|.|.||:.||..||||||::|||.|..|||:|:|||:...::   :|.|||||||
 Frog  1214 KSLLIKQHHLLNALASTRPSISQEDWKFFNHLYENFKNPKQSSRET---WRSGQKVTLA 1269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PEX1NP_000457.1 PEX-2N 17..98 CDD:462730 39/81 (48%)
PEX-1N 104..179 CDD:462729 49/74 (66%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 346..367 5/20 (25%)
CDC48 <595..1065 CDD:273521 333/469 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1260..1283 10/22 (45%)
pex1XP_004915478.1 PEX-2N 11..93 CDD:462730 39/81 (48%)
PEX-1N 99..174 CDD:462729 49/74 (66%)
CDC48 <587..1052 CDD:273521 330/464 (71%)

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