DRSC/TRiP Functional Genomics Resources

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Protein Alignment PEX1 and Nsf2

DIOPT Version :10

Sequence 1:NP_000457.1 Gene:PEX1 / 5189 HGNCID:8850 Length:1283 Species:Homo sapiens
Sequence 2:NP_788676.1 Gene:Nsf2 / 41694 FlyBaseID:FBgn0266464 Length:752 Species:Drosophila melanogaster


Alignment Length:438 Identity:136/438 - (31%)
Similarity:202/438 - (46%) Gaps:62/438 - (14%)


- Green bases have known domain annotations that are detailed below.


Human   810 TTLDFQKALRGFLPASLRSVN-------LHKPRDLGWDKIGGL-HEVRQILMDTIQLPAKYPELF 866
            |.:.|:||....|....||..       ::...|.|...|||| .|...|...........|||.
  Fly   186 TVVQFEKAENSVLNLQGRSKGKIVRQSIINPDWDFGKMGIGGLDKEFNAIFRRAFASRVFPPELV 250

Human   867 ANLPIRQRTGILLYGPPGTGKTLLAGVI-----ARESRMNFISVKGPELLSKYIGASEQAVRDIF 926
            ..|.|:...||||||||||||||:|..|     |||.::    |.||::|.||:|.||..:|.:|
  Fly   251 EQLGIKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKI----VNGPQILDKYVGESEANIRRLF 311

Human   927 IRAQAAKP--------CILFFDEFESIAPRRGH--DNTGVTDRVVNQLLTQLDGVEGLQGVYVLA 981
            ..|:..:.        .|:.|||.::|...||.  .|:||.|.||||||.::||||.|..:.|:.
  Fly   312 AEAEEEEKRLGPNSGLHIIIFDEIDAICKARGSVAGNSGVHDTVVNQLLAKIDGVEQLNNILVIG 376

Human   982 ATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNV----LSDSLPLADDVDLQHVASVTDSF 1042
            .|:|.|:||.||||||||:..:....|::..|::|||:    :.|...:|.|||...:|:.|.:|
  Fly   377 MTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMRDFNKIASDVDNNEIAAKTKNF 441

Human  1043 TGADLKALLYNAQLEALHGMLLSSGLQDGSSSSDSDLSLSSMVFLNHSSGSDDSAGDGECGLDQS 1107
            :||:|:.|:..||..|::.::.:.........:...|.::...|| |:..:|.....|       
  Fly   442 SGAELEGLVRAAQSTAMNRLIKADSKVHVDPEAMEKLRVTRADFL-HALDNDIKPAFG------- 498

Human  1108 LVSLEMSEILPDESKFNMYRLYFGSSYESELGNGTSSDLSSQCLSAPSSMTQDLPGVP--GKDQL 1170
             .:.||.|.|......|     :|......|.:|..|...::...:...::..:.|.|  ||..|
  Fly   499 -AAQEMLENLLARGIIN-----WGPPVTELLEDGMLSVQQAKATESSGLVSVLIEGAPNSGKSAL 557

Human  1171 ------FSQPPVLRTASQEGCQELTQEQR---------DQLRADISII 1203
                  .|..|.::..|.|.....|:..:         |..|:.:|.|
  Fly   558 AANLAQLSDFPFVKVCSPEDMVGFTESAKCLHIRKIFDDAYRSTLSCI 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PEX1NP_000457.1 PEX-2N 17..98 CDD:462730
PEX-1N 104..179 CDD:462729
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 346..367
CDC48 <595..1065 CDD:273521 107/281 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1260..1283
Nsf2NP_788676.1 CDC48_N 9..89 CDD:215012
CDC48_2 117..>170 CDD:215011
RecA-like_NSF-SEC18_r1-like 224..400 CDD:410912 78/179 (44%)
CDC48 <225..>611 CDD:273521 127/399 (32%)
Blue background indicates that the domain is not in the aligned region.

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