DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATP5MC3 and VhaPPA1-2

DIOPT Version :10

Sequence 1:NP_001680.1 Gene:ATP5MC3 / 518 HGNCID:843 Length:142 Species:Homo sapiens
Sequence 2:NP_650406.2 Gene:VhaPPA1-2 / 41806 FlyBaseID:FBgn0262514 Length:212 Species:Drosophila melanogaster


Alignment Length:158 Identity:37/158 - (23%)
Similarity:58/158 - (36%) Gaps:45/158 - (28%)


- Green bases have known domain annotations that are detailed below.


Human     7 LACTPSLIRAGSRVAYRPISASV----LSRPEASRTGEGSTVF---------------NGAQNGV 52
            |||..|::.|.|.:..  |..||    :..|........|.:|               :|..|..
  Fly    60 LACALSVLGAASGIYM--IGCSVAGGGVRSPRIKTKNLISVIFCEAVAIYGLITAILLSGNVNKF 122

Human    53 SQLIQREFQTSAISRDIDTAAKFIGAG----------AATVGVAGSGAGIGTVFGSLIIGYARNP 107
            |. ::....::.::.::.|.....|||          ...||:.||||.:..         |.|.
  Fly   123 SS-VRLITDSTVMATNMFTGFATFGAGLCVGMVNVACGIAVGIVGSGAALAD---------AANS 177

Human   108 SLKQQLFSYAILGFALSEAMGLFCLMVA 135
            :|..::....|.|    .|:|||.|:||
  Fly   178 ALFVKILIVEIFG----SAIGLFGLIVA 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATP5MC3NP_001680.1 ATP9 68..142 CDD:164765 22/78 (28%)
VhaPPA1-2NP_650406.2 ATP-synt_Fo_Vo_Ao_c 53..115 CDD:365782 12/56 (21%)
ATP-synt_Vo_c_ATP6F_rpt2 140..204 CDD:349418 22/75 (29%)

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