DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATP5MC3 and Vha16-4

DIOPT Version :10

Sequence 1:NP_001680.1 Gene:ATP5MC3 / 518 HGNCID:843 Length:142 Species:Homo sapiens
Sequence 2:NP_611169.1 Gene:Vha16-4 / 36900 FlyBaseID:FBgn0262513 Length:155 Species:Drosophila melanogaster


Alignment Length:68 Identity:27/68 - (39%)
Similarity:39/68 - (57%) Gaps:8/68 - (11%)


- Green bases have known domain annotations that are detailed below.


Human    76 IGAGAATVGVAGSGAG--IGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLI 138
            :.||.| |||:|.|||  ||.|..:.:...|:.|    :||...||....:|.:||:.|:|| :.
  Fly    93 LSAGLA-VGVSGMGAGIAIGVVGEAGVRASAQQP----KLFVAIILILIFAEVLGLYGLIVA-IY 151

Human   139 LFA 141
            ||:
  Fly   152 LFS 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATP5MC3NP_001680.1 ATP9 68..142 CDD:164765 27/68 (40%)
Vha16-4NP_611169.1 PRK13469 13..118 CDD:469780 13/25 (52%)
ATP-synt_Vo_c_ATP6C_rpt2 87..153 CDD:349416 25/65 (38%)

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