DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ctps and CTPsyn

DIOPT Version :9

Sequence 1:NP_001342420.1 Gene:Ctps / 51797 MGIID:1858304 Length:591 Species:Mus musculus
Sequence 2:NP_001287067.1 Gene:CTPsyn / 39645 FlyBaseID:FBgn0266452 Length:627 Species:Drosophila melanogaster


Alignment Length:594 Identity:393/594 - (66%)
Similarity:475/594 - (79%) Gaps:9/594 - (1%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MKYILVTGGVISGIGKGVIASSVGTILKSCGLHVTSIKIDPYINIDAGTFSPYEHGEVFVLDDGG 65
            |||||||||||||:||||||||.||:||||||.|||||||||||||||||||||||||:|||||.
  Fly     1 MKYILVTGGVISGVGKGVIASSFGTLLKSCGLDVTSIKIDPYINIDAGTFSPYEHGEVYVLDDGA 65

Mouse    66 EVDLDLGNYERFLDIRLTKDNNLTTGKIYQYVINKERKGDYLGKTVQVVPHITDAIQEWVMRQAL 130
            ||||||||||||||:.|.:|||:||||||:.||.|||.|:||||||||||||||||||||.|.|.
  Fly    66 EVDLDLGNYERFLDVTLHRDNNITTGKIYKLVIEKERTGEYLGKTVQVVPHITDAIQEWVERVAQ 130

Mouse   131 IPVDEDGLEPQVCVIELGGTVGDIESMPFIEAFRQFQFKVKRENFCNIHVSLVPQPSSTGEQKTK 195
            .|| :...:||||::|||||:||||.|||:||||||||:|||||||..||||||.|.:|||.|||
  Fly   131 TPV-QGSSKPQVCIVELGGTIGDIEGMPFVEAFRQFQFRVKRENFCLAHVSLVPLPKATGEPKTK 194

Mouse   196 PTQNSVRELRGLGLSPDLVVCRCSNPLDTSVKEKISMFCHVEPEQVICVHDVSSIYRVPLLLEEQ 260
            |||:|||||||.||||||:|||...|:...||||||.||||.|:||||:||::|||.||||:|:.
  Fly   195 PTQSSVRELRGCGLSPDLIVCRSEKPIGLEVKEKISNFCHVGPDQVICIHDLNSIYHVPLLMEQN 259

Mouse   261 GVVDYFLRRLDLPIERQSR-KMLMKWKEMADRYDRLLETCSIALVGKYTKFSDSYASVIKALEHS 324
            ||::|...||.|.|:...| |.|.:|:::|.|.:.:.....||:|||||||:||||||:|||:|:
  Fly   260 GVIEYLNERLQLNIDMSKRTKCLQQWRDLARRTETVRREVCIAVVGKYTKFTDSYASVVKALQHA 324

Mouse   325 ALAINHKLEIKYIDSTDLEPSTLQEEPVRYHEAWQKLCSAHGVLVPGGFGVRGTEGKIQAIAWAR 389
            |||:|.|||:.:|:|..||..||..||.:||:.|||||.:||:|||||||.||.||||:|..|||
  Fly   325 ALAVNRKLELVFIESCLLEEETLHSEPSKYHKEWQKLCDSHGILVPGGFGSRGMEGKIRACQWAR 389

Mouse   390 KQKKPFLGVCLGMQLAVVEFSRNVLGWQDANSTEFDPKTSHPVVIDMPEHNPGQMGGTMRLGKRR 454
            :.:||.||:|||:|.||:||:||.||.:|||:||.||.|::.:|||||||:.||:|||||||||.
  Fly   390 ENQKPLLGICLGLQAAVIEFARNKLGLKDANTTEIDPNTANALVIDMPEHHTGQLGGTMRLGKRI 454

Mouse   455 TLFQTKNSVMRKLYGDTDYLEERHRHRFEVNPVLKKCLEEQGLKFVGQDVEGERMEIVELEDHPF 519
            |:|....||:|:|||:...::||||||:||||.....|||||::|||.||:..||||:||..||:
  Fly   455 TVFSDGPSVIRQLYGNPKSVQERHRHRYEVNPKYVHLLEEQGMRFVGTDVDKTRMEIIELSGHPY 519

Mouse   520 FVGVQYHPEFLSRPIKPSPPYFGLLLASVGRLPHYLQKGCRLSPR---DTYSDRS----GSSSPD 577
            ||..|||||:||||:|||||:.||:||||.||..|:|:|||||||   |..||..    |.:...
  Fly   520 FVATQYHPEYLSRPLKPSPPFLGLILASVDRLNQYIQRGCRLSPRQLSDASSDEEDSVVGLAGAT 584

Mouse   578 SEITELKFP 586
            ..::.||.|
  Fly   585 KSLSSLKIP 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtpsNP_001342420.1 PLN02327 1..556 CDD:215186 378/555 (68%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 562..591 10/32 (31%)
CTPsynNP_001287067.1 PLN02327 1..556 CDD:215186 378/555 (68%)
CTP_synth_N 2..271 CDD:283956 206/269 (77%)
GATase1_CTP_Synthase 299..544 CDD:153217 155/244 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839535
Domainoid 1 1.000 431 1.000 Domainoid score I582
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20446
Inparanoid 1 1.050 812 1.000 Inparanoid score I479
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60688
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001109
OrthoInspector 1 1.000 - - otm43326
orthoMCL 1 0.900 - - OOG6_100470
Panther 1 1.100 - - LDO PTHR11550
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1048
SonicParanoid 1 1.000 - - X676
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.930

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