DRSC/TRiP Functional Genomics Resources

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Protein Alignment GNG13 and Ggamma30A

DIOPT Version :9

Sequence 1:NP_057625.1 Gene:GNG13 / 51764 HGNCID:14131 Length:67 Species:Homo sapiens
Sequence 2:NP_001285776.1 Gene:Ggamma30A / 45234 FlyBaseID:FBgn0267252 Length:238 Species:Drosophila melanogaster


Alignment Length:67 Identity:28/67 - (41%)
Similarity:43/67 - (64%) Gaps:0/67 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MEEWDVPQMKKEVESLKYQLAFQREMASKTIPELLKWIEDGIPKDPFLNPDLMKNNPWVEKGKCT 65
            ::..|...:||::|::|||.:.:|...||:|.|:..:||:....||.:|....|||||.|||||.
  Fly     6 LQNMDRDALKKQIENMKYQASMERWPLSKSIAEMRSFIEENEKNDPLINAPDKKNNPWAEKGKCV 70

Human    66 IL 67
            |:
  Fly    71 IM 72

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GNG13NP_057625.1 GGL 6..62 CDD:238024 22/55 (40%)
Ggamma30ANP_001285776.1 GGL 11..67 CDD:238024 22/55 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 64 1.000 Domainoid score I10161
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 66 1.000 Inparanoid score I5359
Isobase 1 0.950 - 0 Normalized mean entropy S3677
OMA 1 1.010 - - QHG49271
OrthoDB 1 1.010 - - D1597581at2759
OrthoFinder 1 1.000 - - FOG0006416
OrthoInspector 1 1.000 - - oto90131
orthoMCL 1 0.900 - - OOG6_110441
Panther 1 1.100 - - LDO PTHR15936
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4582
SonicParanoid 1 1.000 - - X4681
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1413.960

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