DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB23 and Rab11

DIOPT Version :10

Sequence 1:NP_057361.3 Gene:RAB23 / 51715 HGNCID:14263 Length:237 Species:Homo sapiens
Sequence 2:NP_477170.1 Gene:Rab11 / 42501 FlyBaseID:FBgn0015790 Length:214 Species:Drosophila melanogaster


Alignment Length:186 Identity:67/186 - (36%)
Similarity:104/186 - (55%) Gaps:10/186 - (5%)


- Green bases have known domain annotations that are detailed below.


Human     3 EEDMEVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAG 67
            |::.:...|:|::|:..||||:::.|:.:..|..:.|.||||:|..|.|:|:.:.::..:|||||
  Fly     5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAG 69

Human    68 QEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVGD-----IPTVLVQNKIDLLD 127
            ||.:.|||.||||||...:||:......::|.|..|    :.|:.|     |..:||.||.||..
  Fly    70 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERW----LRELRDHADQNIVIMLVGNKSDLRH 130

Human   128 DSCIKNEEAEALAKRLKLRFYRTSVKEDLNVNEVFK-YLAEKYLQKLKQQIAEDPE 182
            ...:..:||:..|:|..|.|..||..:..||...|: .|.|.|....::||.:.||
  Fly   131 LRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPE 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB23NP_057361.3 Rab23_like 10..169 CDD:133306 61/164 (37%)
Rab11NP_477170.1 Rab11_like 9..173 CDD:206660 61/167 (37%)

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