DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB23 and Rab23

DIOPT Version :10

Sequence 1:NP_057361.3 Gene:RAB23 / 51715 HGNCID:14263 Length:237 Species:Homo sapiens
Sequence 2:NP_649574.1 Gene:Rab23 / 40701 FlyBaseID:FBgn0037364 Length:268 Species:Drosophila melanogaster


Alignment Length:248 Identity:139/248 - (56%)
Similarity:174/248 - (70%) Gaps:21/248 - (8%)


- Green bases have known domain annotations that are detailed below.


Human     1 MLEEDMEVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDT 65
            |.|:|:|:|||:|:||||.||||||||||||||||||||||||||||||||:::.||||:|||||
  Fly    29 MREDDIELAIKVVIVGNGGVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIEIDGEDVRIMLWDT 93

Human    66 AGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVGDIPTVLVQNKIDLLDDSC 130
            |||||||.|||||||||||.|||||||||.||:|:..|:.||..|..:||||:|||||||::.:.
  Fly    94 AGQEEFDCITKAYYRGAQASVLVFSTTDRASFDAIKDWKRKVENECNEIPTVIVQNKIDLIEQAV 158

Human   131 IKNEEAEALAKRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQ---QIAEDPELT----HSSS 188
            :..:|.|.|||.|..|..|||||||:||..||:|||.|..|.:.|   |:|.:.:.:    :||:
  Fly   159 VTADEVETLAKLLNCRLIRTSVKEDINVASVFRYLATKCHQLMTQSYDQVAGNQQNSSHPPYSST 223

Human   189 NKIGVFNTSGGSHSGQNSGTLNGGDVINLRPNKQR-----TKKNRNPFSSCSI 236
            ..|..|:.   :.:..:|||      |.|||.|:.     .:|.:.....|.|
  Fly   224 PTISAFSP---TFTKSSSGT------IVLRPAKKGHGSSVARKRKIVLKKCGI 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB23NP_057361.3 Rab23_like 10..169 CDD:133306 114/158 (72%)
Rab23NP_649574.1 Rab23_like 50..197 CDD:133306 105/146 (72%)

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