DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB23 and Rab8

DIOPT Version :10

Sequence 1:NP_057361.3 Gene:RAB23 / 51715 HGNCID:14263 Length:237 Species:Homo sapiens
Sequence 2:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster


Alignment Length:227 Identity:70/227 - (30%)
Similarity:112/227 - (49%) Gaps:31/227 - (13%)


- Green bases have known domain annotations that are detailed below.


Human    11 KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAIT 75
            |::::|:..|||:.::.|:.:..|...:..|||:||..|.|:::::.::|.:|||||||.|..||
  Fly    10 KLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQERFRTIT 74

Human    76 KAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEV-GDIPTVLVQNKIDLLDDSCIKNEEAEAL 139
            .||||||...:||:..|..:|||.:.:|...:.... .|:..:|:.||.:|.|...:..|..|.|
  Fly    75 TAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSKERGEQL 139

Human   140 AKRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQQIAEDPELTHSSSNKIGVFNTSGGSHSGQ 204
            |....::|..||.|..:||.|.|..||.....|.::::..:              |...|.|   
  Fly   140 AIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEAN--------------NPPKGGH--- 187

Human   205 NSGTLNGGDVINLRPNKQRTKKNRNPFSSCSI 236
                       .|:|...|||.:.  .|.||:
  Fly   188 -----------QLKPMDSRTKDSW--LSRCSL 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB23NP_057361.3 Rab23_like 10..169 CDD:133306 58/158 (37%)
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 58/161 (36%)

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