DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB23 and Rab6

DIOPT Version :10

Sequence 1:NP_057361.3 Gene:RAB23 / 51715 HGNCID:14263 Length:237 Species:Homo sapiens
Sequence 2:NP_477172.1 Gene:Rab6 / 34636 FlyBaseID:FBgn0015797 Length:208 Species:Drosophila melanogaster


Alignment Length:157 Identity:64/157 - (40%)
Similarity:91/157 - (57%) Gaps:1/157 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    11 KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAIT 75
            |:|.:|..:|||:|:|.|:....|...|:.|||:|||.:.:.:.|..|||.||||||||.|.::.
  Fly    14 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLI 78

Human    76 KAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVG-DIPTVLVQNKIDLLDDSCIKNEEAEAL 139
            .:|.|.:...|:|:..|:..||...|.|.:.|..|.| |:..:||.||.||.|...:..||.|..
  Fly    79 PSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGERK 143

Human   140 AKRLKLRFYRTSVKEDLNVNEVFKYLA 166
            ||.|.:.|..||.|...||.::|:.:|
  Fly   144 AKELNVMFIETSAKAGYNVKQLFRRVA 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB23NP_057361.3 Rab23_like 10..169 CDD:133306 64/157 (41%)
Rab6NP_477172.1 Rab6 13..173 CDD:206654 64/157 (41%)

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