DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB23 and Rab5

DIOPT Version :10

Sequence 1:NP_057361.3 Gene:RAB23 / 51715 HGNCID:14263 Length:237 Species:Homo sapiens
Sequence 2:NP_523457.1 Gene:Rab5 / 33418 FlyBaseID:FBgn0014010 Length:219 Species:Drosophila melanogaster


Alignment Length:225 Identity:72/225 - (32%)
Similarity:116/225 - (51%) Gaps:39/225 - (17%)


- Green bases have known domain annotations that are detailed below.


Human    11 KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAIT 75
            |:|::|..||||||::.|:.||.|.:..:.|||..||.:.|.:.|..|:..:|||||||.:.::.
  Fly    31 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHSLA 95

Human    76 KAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVG-DIPTVLVQNKIDLLDDSCIKNEEAEAL 139
            ..|||||||.::|:...:::||:...:|.:::..:.. :|...|..||.||.:...::.:||:..
  Fly    96 PMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLSNIRVVEFDEAKQY 160

Human   140 AKRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQQIAEDPELTHSSSNKIGVFNTSGGSHSGQ 204
            |:...|.|..||.|..:|||::|..:|:| |.|                                
  Fly   161 AEENGLLFMETSAKTGMNVNDIFLAIAKK-LPK-------------------------------- 192

Human   205 NSGTLNGGDVINLRPNKQRTKKNRNPFSSC 234
            |.|..|.|  .::||.  .|:.|| |.::|
  Fly   193 NDGANNQG--TSIRPT--GTETNR-PTNNC 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB23NP_057361.3 Rab23_like 10..169 CDD:133306 58/158 (37%)
Rab5NP_523457.1 Rab5_related 29..191 CDD:206653 59/160 (37%)

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