DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB23 and Rab35

DIOPT Version :10

Sequence 1:NP_057361.3 Gene:RAB23 / 51715 HGNCID:14263 Length:237 Species:Homo sapiens
Sequence 2:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster


Alignment Length:215 Identity:66/215 - (30%)
Similarity:105/215 - (48%) Gaps:29/215 - (13%)


- Green bases have known domain annotations that are detailed below.


Human    11 KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAIT 75
            |::::|:..|||||::.|:....|:..|..||||||..|.:.:....|:|.:|||||||.|..||
  Fly    10 KLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQERFRTIT 74

Human    76 KAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVGDIPTVLVQNKIDLLDDSCIKNEEAEALA 140
            ..||||....::|:..|:.|||..|..|.|::......:..|||.||.|..|...:..|:|:..|
  Fly    75 STYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDVVKKVLVGNKNDDPDRKVVITEDAQRFA 139

Human   141 KRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQQIAEDPELTHSSSNKIGVFNTSGGSHSGQN 205
            |::.:..:.||.|:::||..:|..:..:.|                             .|..:.
  Fly   140 KQMDIELFETSAKDNINVENMFLSITRQVL-----------------------------DHKLRT 175

Human   206 SGTLNGGDVINLRPNKQRTK 225
            |......|.::|:||.:.:|
  Fly   176 SPNEQQKDTLHLKPNPKGSK 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB23NP_057361.3 Rab23_like 10..169 CDD:133306 58/157 (37%)
Rab35NP_608373.1 Rab35 3..201 CDD:133310 66/215 (31%)

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