DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB23 and Rab9Fb

DIOPT Version :10

Sequence 1:NP_057361.3 Gene:RAB23 / 51715 HGNCID:14263 Length:237 Species:Homo sapiens
Sequence 2:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster


Alignment Length:229 Identity:65/229 - (28%)
Similarity:109/229 - (47%) Gaps:36/229 - (15%)


- Green bases have known domain annotations that are detailed below.


Human    11 KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAIT 75
            |::|:|:..||||.::.|:....||:.:..|:|:||..|.:::....|.|.:|||||.|.|.::.
  Fly     9 KILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDERFKSLL 73

Human    76 KAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVGD-IPTVLVQNKIDLLDDSCIKNEEAEAL 139
            .:|||||...:||:..|..:||..:..|.:::.....: :..:||.||.|.||:..::.|:....
  Fly    74 PSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRMEQGFNY 138

Human   140 AKRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQQIAEDPELTHSSSNKIGVFN--------- 195
            |....|.||..|.|...|||:||..|:                        :|::|         
  Fly   139 ANHRALGFYEVSAKSGANVNDVFNMLS------------------------VGIYNRLVIHTPNR 179

Human   196 TSGGSHSGQNSGTLNGGDVINLRPNKQRTKKNRN 229
            .|||..:...:...:  :.|||....::..|:.|
  Fly   180 LSGGQETEDTAEPPD--EPINLAGKDRQRAKDSN 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB23NP_057361.3 Rab23_like 10..169 CDD:133306 55/158 (35%)
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 54/155 (35%)

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