DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB23 and Rab9Db

DIOPT Version :10

Sequence 1:NP_057361.3 Gene:RAB23 / 51715 HGNCID:14263 Length:237 Species:Homo sapiens
Sequence 2:NP_572642.1 Gene:Rab9Db / 31993 FlyBaseID:FBgn0030221 Length:197 Species:Drosophila melanogaster


Alignment Length:161 Identity:47/161 - (29%)
Similarity:79/161 - (49%) Gaps:7/161 - (4%)


- Green bases have known domain annotations that are detailed below.


Human    11 KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVR----LMLWDTAGQEEF 71
            |::::|:..|||:.::.|:....||:.::.|:|:|  .|:..|...|.|    |.:|||:..|.|
  Fly     9 KIIILGDSGVGKTCLLMRFSDNQFTERHRVTVGMD--RRECSVEFADWRMGRMLQVWDTSDDERF 71

Human    72 DAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVGDIPTV-LVQNKIDLLDDSCIKNEE 135
            ..:.....|.|...:||:..|..:||:.:..|.:::.....|..|| ||.||.|..:...:...:
  Fly    72 KLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVTVLLVGNKSDDPNHRQVSMAQ 136

Human   136 AEALAKRLKLRFYRTSVKEDLNVNEVFKYLA 166
            ....|.|..:.|...|.|...||.::|..||
  Fly   137 GFNYAHRQSICFEEVSAKSGRNVYDIFSSLA 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB23NP_057361.3 Rab23_like 10..169 CDD:133306 47/161 (29%)
Rab9DbNP_572642.1 Rab 8..167 CDD:206640 45/159 (28%)

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