DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB23 and RabX2

DIOPT Version :10

Sequence 1:NP_057361.3 Gene:RAB23 / 51715 HGNCID:14263 Length:237 Species:Homo sapiens
Sequence 2:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster


Alignment Length:187 Identity:54/187 - (28%)
Similarity:97/187 - (51%) Gaps:15/187 - (8%)


- Green bases have known domain annotations that are detailed below.


Human    11 KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAIT 75
            |::|:|:..||||.::.|:....||:.|.:|:|:|...|.:::....:.|.:|||:|.:.|:::.
  Fly     9 KVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRFNSLM 73

Human    76 KAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVGDIPTV-LVQNKIDLLDDSCIKNEEAEAL 139
            .:.||.|...:||:..|..:||:.:..|.:::.....|..|| ||.||.|..:...:..|:....
  Fly    74 PSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSMEQGFNY 138

Human   140 AKRLKLRFYRTSVKEDLNVNEVFKYLA----EKYL----------QKLKQQIAEDPE 182
            |.|..|.|...|.|..:||.::|..||    .:|:          ::.::..||.|:
  Fly   139 AHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHNPISPMPSEQEEEDAAESPD 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB23NP_057361.3 Rab23_like 10..169 CDD:133306 50/162 (31%)
RabX2NP_572627.1 Rab 8..165 CDD:206640 48/155 (31%)

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