DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB23 and Rab27

DIOPT Version :10

Sequence 1:NP_057361.3 Gene:RAB23 / 51715 HGNCID:14263 Length:237 Species:Homo sapiens
Sequence 2:NP_726743.1 Gene:Rab27 / 31103 FlyBaseID:FBgn0025382 Length:236 Species:Drosophila melanogaster


Alignment Length:172 Identity:54/172 - (31%)
Similarity:93/172 - (54%) Gaps:10/172 - (5%)


- Green bases have known domain annotations that are detailed below.


Human    11 KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDED----VRLMLWDTAGQEEF 71
            :.:|:|:..|||:.::.:|..|.|...:..|:|:||.|:::..|...    :.|.:|||||||.|
  Fly    19 QFLVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLLYNSRGRRHRIHLQIWDTAGQERF 83

Human    72 DAITKAYYRGAQACVLVFSTTDRESFEAVSSW----REKVVAEVGDIPTVLVQNKIDLLDDSCIK 132
            .::|.|:||.|...:|:|..|..:||...::|    |....:|..|:  ||..||.|||....:.
  Fly    84 RSLTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSEDPDV--VLCGNKCDLLQLRVVS 146

Human   133 NEEAEALAKRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLK 174
            .::..||.:|.:|.:..||.....||.|..:.|..:.:::::
  Fly   147 RDQVAALCRRYRLPYIETSACTGANVKEAVELLVGRVMERIE 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB23NP_057361.3 Rab23_like 10..169 CDD:133306 54/165 (33%)
Rab27NP_726743.1 P-loop containing Nucleoside Triphosphate Hydrolases 19..187 CDD:476819 54/169 (32%)

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