DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NLK and lit-1

DIOPT Version :10

Sequence 1:NP_057315.3 Gene:NLK / 51701 HGNCID:29858 Length:527 Species:Homo sapiens
Sequence 2:NP_001022805.1 Gene:lit-1 / 176808 WormBaseID:WBGene00003048 Length:634 Species:Caenorhabditis elegans


Alignment Length:588 Identity:299/588 - (50%)
Similarity:359/588 - (61%) Gaps:133/588 - (22%)


- Green bases have known domain annotations that are detailed below.


Human    22 AAAAGHHHHHH---------------HHLPHLP-------------------PPH--LH------ 44
            ||.|.||.||.               ||..|.|                   |||  ||      
 Worm    97 AAVAAHHQHHQQLHPSVQYQLVAAATHHNHHQPQAAQPHYSAVVPRSDVIQQPPHFALHHHLQNL 161

Human    45 ---------HHHHPQ--------HHLHPGSAAAV----------HPVQQ--------HTSSAAAA 74
                     ||||.|        .|.||.:..:.          ..|||        |.||.|..
 Worm   162 VQQQQQQQAHHHHQQLVGEMALVSHTHPAAVGSTTCYEKNQQKQQQVQQIPTQPQVAHVSSNAIL 226

Human    75 AAAAAAAAAMLNPGQQQPYFPSPAPGQAPGPAAAAPAQVQAAAAATVKAHHHQHSHHPQQQLDIE 139
            |||             ||::|.|               ||                      |.:
 Worm   227 AAA-------------QPFYPPP---------------VQ----------------------DSQ 241

Human   140 PDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDIL 204
            ||||||||||||||||||||.||||||||||||||||.||||||||:|||..|:||||||.||||
 Worm   242 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDIL 306

Human   205 QPPHIDYFEEIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGN 269
            ||.:..:|:|:||:||||||||||||||||.|:.||||||:|||||||||||:|.||||||||||
 Worm   307 QPANPSFFQELYVLTELMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGN 371

Human   270 LLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAEL 334
            |||||||:||||||||||..:..:..:||.|||||||||||:|||:|.|:.|:||||||||||||
 Worm   372 LLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAEL 436

Human   335 LGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSLPVLYTLSS--QAT 397
            |.|:|||||..||:||.:|.|||||||.|||:.||||||.|:||...:.|....||.::|  ...
 Worm   437 LQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKN 501

Human   398 HEAVHLLCRMLVFDPSKRISAKDALAHPYLDEGRLRYHTCMCKCCFS--TSTGRVYTSDFEPVTN 460
            ||||.||.::|.|||.||||.::||.|.||:|||||:|:|||.||::  ....|::..|.:|...
 Worm   502 HEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGRLRFHSCMCSCCYTKPNMPSRLFAQDLDPRHE 566

Human   461 PKFDDTFEKNLS--SVRQVKEIIHQFILEQQKGNRVPLCINPQSAAFKSFISSTVAQPSEMPPSP 523
            ..||..:||::|  |:.:::|.::||::::.....|.|||||||||:|:|.||:|||.||:||||
 Worm   567 SPFDPKWEKDMSRLSMFELREKMYQFVMDRPALYGVALCINPQSAAYKNFASSSVAQASELPPSP 631

Human   524 LVW 526
            ..|
 Worm   632 QAW 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NLKNP_057315.3 Required for interaction with TAB2. /evidence=ECO:0000250|UniProtKB:O54949 1..304 172/358 (48%)
Sufficient for interaction with DAPK3. /evidence=ECO:0000269|PubMed:21454679 1..125 40/179 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..72 30/126 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 90..140 7/49 (14%)
Sufficient for interaction with DAPK3. /evidence=ECO:0000269|PubMed:21454679 124..416 204/293 (70%)
STKc_NLK 137..508 CDD:173748 246/376 (65%)
TQE 298..300 1/1 (100%)
Required for homodimerization and kinase activation and localization to the nucleus. /evidence=ECO:0000250|UniProtKB:O54949 428..527 47/103 (46%)
Required for interaction with TAB2. /evidence=ECO:0000250|UniProtKB:O54949 434..527 42/97 (43%)
lit-1NP_001022805.1 STKc_NLK 239..616 CDD:173748 246/376 (65%)

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